{"version": "2.1.0", "$schema": "https://json.schemastore.org/sarif-2.1.0.json", "runs": [{"tool": {"driver": {"name": "Repobility", "informationUri": "https://repobility.com", "rules": [{"id": "scanner-1a639f7c2a310a27", "name": "Possibly dead Python function: find_by_doi", "shortDescription": {"text": "Possibly dead Python function: find_by_doi"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-0d04fe0a04f7c891", "name": "Possibly dead Python function: is_command_exchange", "shortDescription": {"text": "Possibly dead Python function: is_command_exchange"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-d25d8cb74e9fe50d", "name": "Possibly dead Python function: key", "shortDescription": {"text": "Possibly dead Python function: key"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-814b6bfe7e5e8bed", "name": "Possibly dead Python function: advance_or_quarantine", "shortDescription": {"text": "Possibly dead Python function: advance_or_quarantine"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-d37f4120f4b9161d", "name": "Possibly dead Python function: pp_count", "shortDescription": {"text": "Possibly dead Python function: pp_count"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-001e3697ba7de900", "name": "Possibly dead Python function: extract_per_1k_aggregates", "shortDescription": {"text": "Possibly dead Python function: extract_per_1k_aggregates"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-ebfe32d714ca3297", "name": "Possibly dead Python function: maybe_drop", "shortDescription": {"text": "Possibly dead Python function: maybe_drop"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-32d0dfa3f1f5733b", "name": "Privileged port 150 in use", "shortDescription": {"text": "Privileged port 150 in use"}, "fullDescription": {"text": "Port 150 is privileged (<1024). Make sure the service runs with the right caps or front it with a non-privileged port via a load balancer."}, "properties": {"scanner": "scanner-primary", "layer": "network", "severity": "medium", "confidence": 1.0}}, {"id": "scanner-9710c8d059e53154", "name": "No frontend routes/components detected", "shortDescription": {"text": "No frontend routes/components detected"}, "fullDescription": {"text": "No React/Vue/Next routes were found. This is fine for backend-only repos."}, "properties": {"scanner": "scanner-primary", "layer": "frontend", "severity": "info", "confidence": 1.0}}, {"id": "scanner-6372cebde0220094", "name": "No auth library detected", "shortDescription": {"text": "No auth library detected"}, "fullDescription": {"text": "The scanner did not find any standard auth library (JWT, OAuth, NextAuth, Auth0, etc.). The repo has auth/admin/session surface indicators, so auth may live in custom code, in a separate service, or be missing."}, "properties": {"scanner": "scanner-primary", "layer": "security", "severity": "medium", "confidence": 1.0}}, {"id": "scanner-4601e3ad3bb28677", "name": "No CI/CD pipelines detected", "shortDescription": {"text": "No CI/CD pipelines detected"}, "fullDescription": {"text": "No GitHub Actions, GitLab CI, or CircleCI configs found. Without CI you can't gate deploys on tests/lints."}, "properties": {"scanner": "scanner-primary", "layer": "cicd", "severity": "medium", "confidence": 1.0}}, {"id": "scanner-40ed5e5f2719ffa8", "name": "Very large file: tests/test_retrieval_hook.py (2034 lines)", "shortDescription": {"text": "Very large file: tests/test_retrieval_hook.py (2034 lines)"}, "fullDescription": {"text": "Files with >800 lines often hide complexity hotspots and discourage tests."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-0b5a38f4da3f73f4", "name": "Very large file: scripts/lit-scout-zotero-import.py (1592 lines)", "shortDescription": {"text": "Very large file: scripts/lit-scout-zotero-import.py (1592 lines)"}, "fullDescription": {"text": "Files with >800 lines often hide complexity hotspots and discourage tests."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-c375b957a79abe56", "name": "Very large file: hooks/session-start-retrieval.py (1415 lines)", "shortDescription": {"text": "Very large file: hooks/session-start-retrieval.py (1415 lines)"}, "fullDescription": {"text": "Files with >800 lines often hide complexity hotspots and discourage tests."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-141b30a41e03817b", "name": "No license file detected", "shortDescription": {"text": "No license file detected"}, "fullDescription": {"text": "No LICENSE/COPYING/NOTICE file was found. Generated repositories often omit licensing, which blocks reuse and automated intake."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-3ab5d313dda8e5f9", "name": "Debug logging residue appears in source files", "shortDescription": {"text": "Debug logging residue appears in source files"}, "fullDescription": {"text": "Found 470 console/debugger/print-style debug statements in non-test source. This is a common fast-generation residue before production cleanup."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-2d0c7b7ab8f8aacf", "name": "Critical user flow still appears backed by mock or placeholder data", "shortDescription": {"text": "Critical user flow still appears backed by mock or placeholder data"}, "fullDescription": {"text": "A payment/auth/admin/order/billing-style flow contains mock, fake, TODO, dummy, or placeholder markers in runtime source. In the Fable corpus this is a high-leverage completeness smell: the app can look finished while the money, identity, or tenant flow is still scaffolded."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "medium", "confidence": 1.0}}, {"id": "scanner-b9088664ace7f748", "name": "Composite production-readiness gap", "shortDescription": {"text": "Composite production-readiness gap"}, "fullDescription": {"text": "Multiple low-cost hardening controls are missing together: license, ci. Opus verification showed these co-occurring gaps are a better readiness signal than reading each flag in isolation."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-749d4bc1bd66df5f", "name": "Agent instructions exist but release-hardening basics are missing", "shortDescription": {"text": "Agent instructions exist but release-hardening basics are missing"}, "fullDescription": {"text": "AI-coder instruction files were found, but the repo is missing license, ci. Treat this as a contract gap: the agent is guided, but the generated output is not yet guarded by the controls that make it repeatable."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "medium", "confidence": 1.0}}, {"id": "scanner-ea8f3013f588db25", "name": "Shallow git history limits provenance confidence", "shortDescription": {"text": "Shallow git history limits provenance confidence"}, "fullDescription": {"text": "The repository is a shallow clone. Origin/evolution analysis cannot distinguish fresh generation, imported legacy code, or long-lived human code with high confidence."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-8424db9c75e04ba4", "name": "Very short observed git history", "shortDescription": {"text": "Very short observed git history"}, "fullDescription": {"text": "The repo has multiple source files but two or fewer visible commits. This is not a failure by itself, but it lowers confidence in evolution-based diagnosis."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-6fa226c1e1ff3b0d", "name": "Agent authority lacks a verifier contract: skills/phase-gate/SKILL.md", "shortDescription": {"text": "Agent authority lacks a verifier contract: skills/phase-gate/SKILL.md"}, "fullDescription": {"text": "This agent instruction grants code or shell authority but does not state the verification gate that decides promotion. The recurring safe pattern is: LLM proposes; deterministic tests/build/security checks verify; only verified code promotes."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "medium", "confidence": 1.0}}, {"id": "scanner-c5ff40bb844ce88b", "name": "Legacy-named symbol `days_old` in tests/test_retrieval_hook.py:1280", "shortDescription": {"text": "Legacy-named symbol `days_old` in tests/test_retrieval_hook.py:1280"}, "fullDescription": {"text": "Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-397002b2c629aa38", "name": "Commented-code block (7 lines) in tests/test_extraction_hook.py:224", "shortDescription": {"text": "Commented-code block (7 lines) in tests/test_extraction_hook.py:224"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-b83c088a0c5ddde8", "name": "Commented-code block (8 lines) in tests/test_rebuild_postgres.py:367", "shortDescription": {"text": "Commented-code block (8 lines) in tests/test_rebuild_postgres.py:367"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-d0453a2086e0c522", "name": "Commented-code block (6 lines) in tests/test_jsonl_flock.py:263", "shortDescription": {"text": "Commented-code block (6 lines) in tests/test_jsonl_flock.py:263"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-b26999d91a24c6d2", "name": "Legacy-named symbol `skipped_legacy` in tests/test_sync_to_zotero.py:365", "shortDescription": {"text": "Legacy-named symbol `skipped_legacy` in tests/test_sync_to_zotero.py:365"}, "fullDescription": {"text": "Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-c0afd3fdd580c383", "name": "Commented-code block (5 lines) in tests/test_sync_script.py:459", "shortDescription": {"text": "Commented-code block (5 lines) in tests/test_sync_script.py:459"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-0fe364fd22787dbd", "name": "Commented-code block (5 lines) in tests/test_sync_sessions.py:424", "shortDescription": {"text": "Commented-code block (5 lines) in tests/test_sync_sessions.py:424"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-ce341b17cd06efb2", "name": "Commented-code block (5 lines) in scripts/apply-decay.py:95", "shortDescription": {"text": "Commented-code block (5 lines) in scripts/apply-decay.py:95"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-4c808f8b77f50e23", "name": "Commented-code block (8 lines) in scripts/lit-scout-zotero-import.py:112", "shortDescription": {"text": "Commented-code block (8 lines) in scripts/lit-scout-zotero-import.py:112"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-9476b21924229dc0", "name": "Commented-code block (6 lines) in scripts/bulk-archive.py:236", "shortDescription": {"text": "Commented-code block (6 lines) in scripts/bulk-archive.py:236"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-f64dd900a03b5aff", "name": "Commented-code block (5 lines) in scripts/zotero.py:383", "shortDescription": {"text": "Commented-code block (5 lines) in scripts/zotero.py:383"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-248a6c7788048511", "name": "Commented-code block (6 lines) in scripts/rebuild-postgres.py:92", "shortDescription": {"text": "Commented-code block (6 lines) in scripts/rebuild-postgres.py:92"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-b6a202028ef87a30", "name": "Commented-code block (6 lines) in scripts/fetch-memories.py:773", "shortDescription": {"text": "Commented-code block (6 lines) in scripts/fetch-memories.py:773"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-b5ddf88040bb77d9", "name": "Commented-code block (12 lines) in scripts/resample-bake-off-manifest.py:387", "shortDescription": {"text": "Commented-code block (12 lines) in scripts/resample-bake-off-manifest.py:387"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-6f88a23796e7ab51", "name": "Commented-code block (5 lines) in scripts/surfacing_stats.py:91", "shortDescription": {"text": "Commented-code block (5 lines) in scripts/surfacing_stats.py:91"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-8970219546c4c0b2", "name": "Commented-code block (5 lines) in scripts/lit-search.py:432", "shortDescription": {"text": "Commented-code block (5 lines) in scripts/lit-search.py:432"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-88f922b7eceecc13", "name": "Commented-code block (6 lines) in scripts/monthly-archive.py:460", "shortDescription": {"text": "Commented-code block (6 lines) in scripts/monthly-archive.py:460"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-cd7abe780ddb7091", "name": "Network/subprocess call without timeout or try/except \u2014 scripts/monthly-archive.py:323", "shortDescription": {"text": "Network/subprocess call without timeout or try/except \u2014 scripts/monthly-archive.py:323"}, "fullDescription": {"text": "`subprocess.run(...)` here lacks both a `timeout=` arg and an enclosing try/except. This is exactly the class of bug that took down our git-clone earlier (HTTP/2 stream cancel surfaced as a fatal). Add a `timeout=` and wrap in try/except, or use a wrapper that retries."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "medium", "confidence": 1.0}}, {"id": "scanner-5ff3f570d7ebb568", "name": "Commented-code block (5 lines) in scripts/digest.py:71", "shortDescription": {"text": "Commented-code block (5 lines) in scripts/digest.py:71"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-1be9cbffc3bf267b", "name": "Commented-code block (7 lines) in scripts/bake-off-metadata.py:73", "shortDescription": {"text": "Commented-code block (7 lines) in scripts/bake-off-metadata.py:73"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-2593321a9560e73a", "name": "Commented-code block (5 lines) in scripts/archive-memories.py:165", "shortDescription": {"text": "Commented-code block (5 lines) in scripts/archive-memories.py:165"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-b83b7fbcfc43c0d1", "name": "Network/subprocess call without timeout or try/except \u2014 scripts/archive-memories.py:412", "shortDescription": {"text": "Network/subprocess call without timeout or try/except \u2014 scripts/archive-memories.py:412"}, "fullDescription": {"text": "`subprocess.run(...)` here lacks both a `timeout=` arg and an enclosing try/except. This is exactly the class of bug that took down our git-clone earlier (HTTP/2 stream cancel surfaced as a fatal). Add a `timeout=` and wrap in try/except, or use a wrapper that retries."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "medium", "confidence": 1.0}}, {"id": "scanner-30d5aaf28b24b3fb", "name": "Commented-code block (7 lines) in scripts/_command_markers.py:66", "shortDescription": {"text": "Commented-code block (7 lines) in scripts/_command_markers.py:66"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-fc592b1bdd7af790", "name": "Commented-code block (8 lines) in scripts/audit-postgres-sync.py:61", "shortDescription": {"text": "Commented-code block (8 lines) in scripts/audit-postgres-sync.py:61"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-cf6d39e6f3490ca1", "name": "Commented-code block (11 lines) in scripts/sync-to-postgres.py:59", "shortDescription": {"text": "Commented-code block (11 lines) in scripts/sync-to-postgres.py:59"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-21d36a068ba11512", "name": "Commented-code block (5 lines) in scripts/backfill-summaries.py:223", "shortDescription": {"text": "Commented-code block (5 lines) in scripts/backfill-summaries.py:223"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-cef6afe1368cccd3", "name": "Commented-code block (6 lines) in scripts/_bulk_rewrite_guard.py:349", "shortDescription": {"text": "Commented-code block (6 lines) in scripts/_bulk_rewrite_guard.py:349"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-ed2788825ff7fd5a", "name": "Network/subprocess call without timeout or try/except \u2014 scripts/_bulk_rewrite_guard.py:135", "shortDescription": {"text": "Network/subprocess call without timeout or try/except \u2014 scripts/_bulk_rewrite_guard.py:135"}, "fullDescription": {"text": "`subprocess.run(...)` here lacks both a `timeout=` arg and an enclosing try/except. This is exactly the class of bug that took down our git-clone earlier (HTTP/2 stream cancel surfaced as a fatal). Add a `timeout=` and wrap in try/except, or use a wrapper that retries."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "medium", "confidence": 1.0}}, {"id": "scanner-1a35b8dd47e8a9de", "name": "Commented-code block (6 lines) in scripts/embed.py:155", "shortDescription": {"text": "Commented-code block (6 lines) in scripts/embed.py:155"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-d14e2d69b0a4a2c9", "name": "Commented-code block (5 lines) in scripts/project_id.py:104", "shortDescription": {"text": "Commented-code block (5 lines) in scripts/project_id.py:104"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-188655064fe2fef0", "name": "Commented-code block (7 lines) in scripts/recover_anchors.py:344", "shortDescription": {"text": "Commented-code block (7 lines) in scripts/recover_anchors.py:344"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-93c32981403e00c3", "name": "Network/subprocess call without timeout or try/except \u2014 scripts/recover_anchors.py:366", "shortDescription": {"text": "Network/subprocess call without timeout or try/except \u2014 scripts/recover_anchors.py:366"}, "fullDescription": {"text": "`subprocess.run(...)` here lacks both a `timeout=` arg and an enclosing try/except. This is exactly the class of bug that took down our git-clone earlier (HTTP/2 stream cancel surfaced as a fatal). Add a `timeout=` and wrap in try/except, or use a wrapper that retries."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "medium", "confidence": 1.0}}, {"id": "scanner-625af0b2198ea743", "name": "Commented-code block (7 lines) in scripts/reprocess-sessions.py:480", "shortDescription": {"text": "Commented-code block (7 lines) in scripts/reprocess-sessions.py:480"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-5f8ae9e5bf081884", "name": "Commented-code block (5 lines) in scripts/backfill-embeddings.py:215", "shortDescription": {"text": "Commented-code block (5 lines) in scripts/backfill-embeddings.py:215"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-e7c67da1c949da5d", "name": "Commented-code block (6 lines) in scripts/dedup-memories.py:345", "shortDescription": {"text": "Commented-code block (6 lines) in scripts/dedup-memories.py:345"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-7690138e08a085a7", "name": "Legacy-named symbol `skipped_legacy` in scripts/sync-to-zotero.py:175", "shortDescription": {"text": "Legacy-named symbol `skipped_legacy` in scripts/sync-to-zotero.py:175"}, "fullDescription": {"text": "Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-3d0497d85db51501", "name": "Commented-code block (5 lines) in scripts/sync-to-zotero.py:54", "shortDescription": {"text": "Commented-code block (5 lines) in scripts/sync-to-zotero.py:54"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-f8fd3a4ad1e4316f", "name": "Commented-code block (5 lines) in scripts/anchor_verify.py:443", "shortDescription": {"text": "Commented-code block (5 lines) in scripts/anchor_verify.py:443"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-8492ea91648d78f1", "name": "Commented-code block (10 lines) in scripts/style-analyser/phase3_promotion.py:46", "shortDescription": {"text": "Commented-code block (10 lines) in scripts/style-analyser/phase3_promotion.py:46"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-d6be29d8894eba6d", "name": "Commented-code block (6 lines) in scripts/style-analyser/extract_corpus.py:64", "shortDescription": {"text": "Commented-code block (6 lines) in scripts/style-analyser/extract_corpus.py:64"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-cea977b4f8de767a", "name": "Commented-code block (5 lines) in scripts/style-analyser/phase1_pipeline.py:101", "shortDescription": {"text": "Commented-code block (5 lines) in scripts/style-analyser/phase1_pipeline.py:101"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-e83e184b21143261", "name": "Commented-code block (8 lines) in scripts/style-analyser/efficacy_build_prompts.py:87", "shortDescription": {"text": "Commented-code block (8 lines) in scripts/style-analyser/efficacy_build_prompts.py:87"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-30de01271294b50e", "name": "Commented-code block (6 lines) in scripts/style-analyser/phase5_evaluator.py:117", "shortDescription": {"text": "Commented-code block (6 lines) in scripts/style-analyser/phase5_evaluator.py:117"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-1851203708686574", "name": "Commented-code block (5 lines) in scripts/style-analyser/validate_announce_colon.py:224", "shortDescription": {"text": "Commented-code block (5 lines) in scripts/style-analyser/validate_announce_colon.py:224"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-7fb05ad061a8075c", "name": "Commented-code block (5 lines) in hooks/session-start-retrieval.py:50", "shortDescription": {"text": "Commented-code block (5 lines) in hooks/session-start-retrieval.py:50"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-2893e23552f2d202", "name": "Commented-code block (8 lines) in hooks/session-start-accountability.py:86", "shortDescription": {"text": "Commented-code block (8 lines) in hooks/session-start-accountability.py:86"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-8f62d6f4cc1c7849", "name": "Commented-code block (5 lines) in hooks/session-start-code-state.py:40", "shortDescription": {"text": "Commented-code block (5 lines) in hooks/session-start-code-state.py:40"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-05eba06d838dbfaa", "name": "Commented-code block (6 lines) in hooks/extraction-hook.py:53", "shortDescription": {"text": "Commented-code block (6 lines) in hooks/extraction-hook.py:53"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-be46ea126aa5d8dc", "name": "Near-duplicate function bodies in 3 places", "shortDescription": {"text": "Near-duplicate function bodies in 3 places"}, "fullDescription": {"text": "Functions with the same first-5-line body hash:\nscripts/bulk-archive.py:load_env, scripts/backfill-summaries.py:load_env, scripts/reprocess-sessions.py:load_env\n\nThis is *the* AI-coder failure mode (4\u00d7 more duplication in vibe-coded repos \u2014 see https://jw.hn/ai-code-hygiene). Consolidate or document why they're separate."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-2c04133e54348533", "name": "Near-duplicate function bodies in 2 places", "shortDescription": {"text": "Near-duplicate function bodies in 2 places"}, "fullDescription": {"text": "Functions with the same first-5-line body hash:\nscripts/digest.py:render_entry, scripts/digest.py:render\n\nThis is *the* AI-coder failure mode (4\u00d7 more duplication in vibe-coded repos \u2014 see https://jw.hn/ai-code-hygiene). Consolidate or document why they're separate."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}]}}, "automationDetails": {"id": "repobility/18954"}, "properties": {"repository": "saross/personal-assistant", "repoUrl": "https://github.com/saross/personal-assistant", "branch": "main"}, "results": [{"ruleId": "scanner-1a639f7c2a310a27", "level": "note", "message": {"text": "Possibly dead Python function: find_by_doi"}, "properties": {"repobilityId": "15af6c04321ecfdb", "scanner": "scanner-primary", "fingerprint": "1a639f7c2a310a27", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "scripts/zotero.py:406"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-0d04fe0a04f7c891", "level": "note", "message": {"text": "Possibly dead Python function: is_command_exchange"}, "properties": {"repobilityId": "fe3b9bed2cd52113", "scanner": "scanner-primary", "fingerprint": "0d04fe0a04f7c891", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "scripts/_command_markers.py:79"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-d25d8cb74e9fe50d", "level": "note", "message": {"text": "Possibly dead Python function: key"}, "properties": {"repobilityId": "82ad9f64418e6fec", "scanner": "scanner-primary", "fingerprint": "d25d8cb74e9fe50d", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "scripts/dedup-memories.py:128"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-814b6bfe7e5e8bed", "level": "note", "message": {"text": "Possibly dead Python function: advance_or_quarantine"}, "properties": {"repobilityId": "8616bdf4e4c1c87b", "scanner": "scanner-primary", "fingerprint": "814b6bfe7e5e8bed", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "scripts/_sync_cursor.py:137"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-d37f4120f4b9161d", "level": "note", "message": {"text": "Possibly dead Python function: pp_count"}, "properties": {"repobilityId": "0567efba99c92e47", "scanner": "scanner-primary", "fingerprint": "d37f4120f4b9161d", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "scripts/style-analyser/phase3_promotion.py:217"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-001e3697ba7de900", "level": "note", "message": {"text": "Possibly dead Python function: extract_per_1k_aggregates"}, "properties": {"repobilityId": "83fd7759bd33ec62", "scanner": "scanner-primary", "fingerprint": "001e3697ba7de900", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "scripts/style-analyser/phase3_guide_verifier.py:205"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-ebfe32d714ca3297", "level": "note", "message": {"text": "Possibly dead Python function: maybe_drop"}, "properties": {"repobilityId": "a28a5bcd2a32517a", "scanner": "scanner-primary", "fingerprint": "ebfe32d714ca3297", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "scripts/style-analyser/extract_corpus.py:249"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-32d0dfa3f1f5733b", "level": "warning", "message": {"text": "Privileged port 150 in use"}, "properties": {"repobilityId": "06dfcea24ef263cd", "scanner": "scanner-primary", "fingerprint": "32d0dfa3f1f5733b", "layer": "network", "severity": "medium", "confidence": 1.0, "tags": ["security", "ports"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "scripts/ollama-endpoint.sh"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-9710c8d059e53154", "level": "none", "message": {"text": "No frontend routes/components detected"}, "properties": {"repobilityId": "44ca61485762e494", "scanner": "scanner-primary", "fingerprint": "9710c8d059e53154", "layer": "frontend", "severity": "info", "confidence": 1.0, "tags": ["coverage"]}}, {"ruleId": "scanner-6372cebde0220094", "level": "warning", "message": {"text": "No auth library detected"}, "properties": {"repobilityId": "a5b6035a5bbf8054", "scanner": "scanner-primary", "fingerprint": "6372cebde0220094", "layer": "security", "severity": "medium", "confidence": 1.0, "tags": ["coverage", "auth"]}}, {"ruleId": "scanner-4601e3ad3bb28677", "level": "warning", "message": {"text": "No CI/CD pipelines detected"}, "properties": {"repobilityId": "c3ee439bce2bc51e", "scanner": "scanner-primary", "fingerprint": "4601e3ad3bb28677", "layer": "cicd", "severity": "medium", "confidence": 1.0, "tags": ["coverage"]}}, {"ruleId": "scanner-40ed5e5f2719ffa8", "level": "note", "message": {"text": "Very large file: tests/test_retrieval_hook.py (2034 lines)"}, "properties": {"repobilityId": "23401b9035b2a746", "scanner": "scanner-primary", "fingerprint": "40ed5e5f2719ffa8", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["complexity"]}}, {"ruleId": "scanner-0b5a38f4da3f73f4", "level": "note", "message": {"text": "Very large file: scripts/lit-scout-zotero-import.py (1592 lines)"}, "properties": {"repobilityId": "18cffd5132264f5b", "scanner": "scanner-primary", "fingerprint": "0b5a38f4da3f73f4", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["complexity"]}}, {"ruleId": "scanner-c375b957a79abe56", "level": "note", "message": {"text": "Very large file: hooks/session-start-retrieval.py (1415 lines)"}, "properties": {"repobilityId": "91350499de8749a8", "scanner": "scanner-primary", "fingerprint": "c375b957a79abe56", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["complexity"]}}, {"ruleId": "scanner-141b30a41e03817b", "level": "note", "message": {"text": "No license file detected"}, "properties": {"repobilityId": "72499dec5a486c07", "scanner": "scanner-primary", "fingerprint": "141b30a41e03817b", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["license", "repo-hardening", "generated-repo-pattern"]}}, {"ruleId": "scanner-3ab5d313dda8e5f9", "level": "note", "message": {"text": "Debug logging residue appears in source files"}, "properties": {"repobilityId": "0768d1d573dff124", "scanner": "scanner-primary", "fingerprint": "3ab5d313dda8e5f9", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["debug", "cleanup", "repo-hardening", "generated-repo-pattern"]}}, {"ruleId": "scanner-2d0c7b7ab8f8aacf", "level": "warning", "message": {"text": "Critical user flow still appears backed by mock or placeholder data"}, "properties": {"repobilityId": "a231d2b85d5b53be", "scanner": "scanner-primary", "fingerprint": "2d0c7b7ab8f8aacf", "layer": "quality", "severity": "medium", "confidence": 1.0, "tags": ["placeholder", "mock-data", "critical-flow", "generated-repo-pattern"]}}, {"ruleId": "scanner-b9088664ace7f748", "level": "note", "message": {"text": "Composite production-readiness gap"}, "properties": {"repobilityId": "8ac6aef007cf38b0", "scanner": "scanner-primary", "fingerprint": "b9088664ace7f748", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["production-readiness", "repo-hardening", "generated-repo-pattern"]}}, {"ruleId": "scanner-749d4bc1bd66df5f", "level": "warning", "message": {"text": "Agent instructions exist but release-hardening basics are missing"}, "properties": {"repobilityId": "c029144b1b884101", "scanner": "scanner-primary", "fingerprint": "749d4bc1bd66df5f", "layer": "quality", "severity": "medium", "confidence": 1.0, "tags": ["agent-instructions", "repo-hardening", "generated-repo-pattern"]}}, {"ruleId": "scanner-ea8f3013f588db25", "level": "note", "message": {"text": "Shallow git history limits provenance confidence"}, "properties": {"repobilityId": "e8274e902c031494", "scanner": "scanner-primary", "fingerprint": "ea8f3013f588db25", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["provenance", "git-history", "generated-repo-pattern"]}}, {"ruleId": "scanner-8424db9c75e04ba4", "level": "none", "message": {"text": "Very short observed git history"}, "properties": {"repobilityId": "785914282388fcb2", "scanner": "scanner-primary", "fingerprint": "8424db9c75e04ba4", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["provenance", "git-history", "generated-repo-pattern"]}}, {"ruleId": "scanner-6fa226c1e1ff3b0d", "level": "warning", "message": {"text": "Agent authority lacks a verifier contract: skills/phase-gate/SKILL.md"}, "properties": {"repobilityId": "bd3d35d286cfaecf", "scanner": "scanner-primary", "fingerprint": "6fa226c1e1ff3b0d", "layer": "quality", "severity": "medium", "confidence": 1.0, "tags": ["agent-instructions", "verification", "skill_file"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "skills/phase-gate/SKILL.md"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-c5ff40bb844ce88b", "level": "note", "message": {"text": "Legacy-named symbol `days_old` in tests/test_retrieval_hook.py:1280"}, "properties": {"repobilityId": "4b31ce6b34737864", "scanner": "scanner-primary", "fingerprint": "c5ff40bb844ce88b", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "legacy-marker", "dead-code"]}}, {"ruleId": "scanner-397002b2c629aa38", "level": "none", "message": {"text": "Commented-code block (7 lines) in tests/test_extraction_hook.py:224"}, "properties": {"repobilityId": "2369a38f5dd461be", "scanner": "scanner-primary", "fingerprint": "397002b2c629aa38", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-b83c088a0c5ddde8", "level": "none", "message": {"text": "Commented-code block (8 lines) in tests/test_rebuild_postgres.py:367"}, "properties": {"repobilityId": "b2a6b2b5997251f4", "scanner": "scanner-primary", "fingerprint": "b83c088a0c5ddde8", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-d0453a2086e0c522", "level": "none", "message": {"text": "Commented-code block (6 lines) in tests/test_jsonl_flock.py:263"}, "properties": {"repobilityId": "917640f64b92af3d", "scanner": "scanner-primary", "fingerprint": "d0453a2086e0c522", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-b26999d91a24c6d2", "level": "note", "message": {"text": "Legacy-named symbol `skipped_legacy` in tests/test_sync_to_zotero.py:365"}, "properties": {"repobilityId": "53466aa1ec72d235", "scanner": "scanner-primary", "fingerprint": "b26999d91a24c6d2", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "legacy-marker", "dead-code"]}}, {"ruleId": "scanner-c0afd3fdd580c383", "level": "none", "message": {"text": "Commented-code block (5 lines) in tests/test_sync_script.py:459"}, "properties": {"repobilityId": "0c86745dbb96e70a", "scanner": "scanner-primary", "fingerprint": "c0afd3fdd580c383", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-0fe364fd22787dbd", "level": "none", "message": {"text": "Commented-code block (5 lines) in tests/test_sync_sessions.py:424"}, "properties": {"repobilityId": "468ecf128728ceab", "scanner": "scanner-primary", "fingerprint": "0fe364fd22787dbd", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-ce341b17cd06efb2", "level": "none", "message": {"text": "Commented-code block (5 lines) in scripts/apply-decay.py:95"}, "properties": {"repobilityId": "a79cb3c20e7e117b", "scanner": "scanner-primary", "fingerprint": "ce341b17cd06efb2", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-4c808f8b77f50e23", "level": "none", "message": {"text": "Commented-code block (8 lines) in scripts/lit-scout-zotero-import.py:112"}, "properties": {"repobilityId": "4488f3ca865d5235", "scanner": "scanner-primary", "fingerprint": "4c808f8b77f50e23", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-9476b21924229dc0", "level": "none", "message": {"text": "Commented-code block (6 lines) in scripts/bulk-archive.py:236"}, "properties": {"repobilityId": "8ca331becdb2129a", "scanner": "scanner-primary", "fingerprint": "9476b21924229dc0", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-f64dd900a03b5aff", "level": "none", "message": {"text": "Commented-code block (5 lines) in scripts/zotero.py:383"}, "properties": {"repobilityId": "8348cb197ebc4a94", "scanner": "scanner-primary", "fingerprint": "f64dd900a03b5aff", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-248a6c7788048511", "level": "none", "message": {"text": "Commented-code block (6 lines) in scripts/rebuild-postgres.py:92"}, "properties": {"repobilityId": "ea4b4933b8d48670", "scanner": "scanner-primary", "fingerprint": "248a6c7788048511", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-b6a202028ef87a30", "level": "none", "message": {"text": "Commented-code block (6 lines) in scripts/fetch-memories.py:773"}, "properties": {"repobilityId": "7f026d2e2750d555", "scanner": "scanner-primary", "fingerprint": "b6a202028ef87a30", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-b5ddf88040bb77d9", "level": "none", "message": {"text": "Commented-code block (12 lines) in scripts/resample-bake-off-manifest.py:387"}, "properties": {"repobilityId": "ad492a000b1c221e", "scanner": "scanner-primary", "fingerprint": "b5ddf88040bb77d9", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-6f88a23796e7ab51", "level": "none", "message": {"text": "Commented-code block (5 lines) in scripts/surfacing_stats.py:91"}, "properties": {"repobilityId": "dc29f51846f30795", "scanner": "scanner-primary", "fingerprint": "6f88a23796e7ab51", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-8970219546c4c0b2", "level": "none", "message": {"text": "Commented-code block (5 lines) in scripts/lit-search.py:432"}, "properties": {"repobilityId": "fb0af27ecacbf7f6", "scanner": "scanner-primary", "fingerprint": "8970219546c4c0b2", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-88f922b7eceecc13", "level": "none", "message": {"text": "Commented-code block (6 lines) in scripts/monthly-archive.py:460"}, "properties": {"repobilityId": "dd990e78799d93f6", "scanner": "scanner-primary", "fingerprint": "88f922b7eceecc13", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-cd7abe780ddb7091", "level": "warning", "message": {"text": "Network/subprocess call without timeout or try/except \u2014 scripts/monthly-archive.py:323"}, "properties": {"repobilityId": "60ae4fd2e8ce2c32", "scanner": "scanner-primary", "fingerprint": "cd7abe780ddb7091", "layer": "quality", "severity": "medium", "confidence": 1.0, "tags": ["integrity", "fragile-runtime", "robustness"]}}, {"ruleId": "scanner-5ff3f570d7ebb568", "level": "none", "message": {"text": "Commented-code block (5 lines) in scripts/digest.py:71"}, "properties": {"repobilityId": "ba098026b1ecae48", "scanner": "scanner-primary", "fingerprint": "5ff3f570d7ebb568", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-1be9cbffc3bf267b", "level": "none", "message": {"text": "Commented-code block (7 lines) in scripts/bake-off-metadata.py:73"}, "properties": {"repobilityId": "ab9f86524d24ec2e", "scanner": "scanner-primary", "fingerprint": "1be9cbffc3bf267b", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-2593321a9560e73a", "level": "none", "message": {"text": "Commented-code block (5 lines) in scripts/archive-memories.py:165"}, "properties": {"repobilityId": "fa36992400d6b2ce", "scanner": "scanner-primary", "fingerprint": "2593321a9560e73a", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-b83b7fbcfc43c0d1", "level": "warning", "message": {"text": "Network/subprocess call without timeout or try/except \u2014 scripts/archive-memories.py:412"}, "properties": {"repobilityId": "b2113b41cfb31b8b", "scanner": "scanner-primary", "fingerprint": "b83b7fbcfc43c0d1", "layer": "quality", "severity": "medium", "confidence": 1.0, "tags": ["integrity", "fragile-runtime", "robustness"]}}, {"ruleId": "scanner-30d5aaf28b24b3fb", "level": "none", "message": {"text": "Commented-code block (7 lines) in scripts/_command_markers.py:66"}, "properties": {"repobilityId": "1e1bfc3bceda02e3", "scanner": "scanner-primary", "fingerprint": "30d5aaf28b24b3fb", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-fc592b1bdd7af790", "level": "none", "message": {"text": "Commented-code block (8 lines) in scripts/audit-postgres-sync.py:61"}, "properties": {"repobilityId": "2dc97e95aa514302", "scanner": "scanner-primary", "fingerprint": "fc592b1bdd7af790", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-cf6d39e6f3490ca1", "level": "none", "message": {"text": "Commented-code block (11 lines) in scripts/sync-to-postgres.py:59"}, "properties": {"repobilityId": "a5393a6c921dde14", "scanner": "scanner-primary", "fingerprint": "cf6d39e6f3490ca1", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-21d36a068ba11512", "level": "none", "message": {"text": "Commented-code block (5 lines) in scripts/backfill-summaries.py:223"}, "properties": {"repobilityId": "80616550dbb6818e", "scanner": "scanner-primary", "fingerprint": "21d36a068ba11512", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-cef6afe1368cccd3", "level": "none", "message": {"text": "Commented-code block (6 lines) in scripts/_bulk_rewrite_guard.py:349"}, "properties": {"repobilityId": "9e31b3008ed64132", "scanner": "scanner-primary", "fingerprint": "cef6afe1368cccd3", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-ed2788825ff7fd5a", "level": "warning", "message": {"text": "Network/subprocess call without timeout or try/except \u2014 scripts/_bulk_rewrite_guard.py:135"}, "properties": {"repobilityId": "f1bfa9d17c6acd99", "scanner": "scanner-primary", "fingerprint": "ed2788825ff7fd5a", "layer": "quality", "severity": "medium", "confidence": 1.0, "tags": ["integrity", "fragile-runtime", "robustness"]}}, {"ruleId": "scanner-1a35b8dd47e8a9de", "level": "none", "message": {"text": "Commented-code block (6 lines) in scripts/embed.py:155"}, "properties": {"repobilityId": "7d7bdff2cd5aa512", "scanner": "scanner-primary", "fingerprint": "1a35b8dd47e8a9de", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-d14e2d69b0a4a2c9", "level": "none", "message": {"text": "Commented-code block (5 lines) in scripts/project_id.py:104"}, "properties": {"repobilityId": "ebfe2cffac447f22", "scanner": "scanner-primary", "fingerprint": "d14e2d69b0a4a2c9", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-188655064fe2fef0", "level": "none", "message": {"text": "Commented-code block (7 lines) in scripts/recover_anchors.py:344"}, "properties": {"repobilityId": "66a328400db08cec", "scanner": "scanner-primary", "fingerprint": "188655064fe2fef0", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-93c32981403e00c3", "level": "warning", "message": {"text": "Network/subprocess call without timeout or try/except \u2014 scripts/recover_anchors.py:366"}, "properties": {"repobilityId": "aff1bf056fc51e8a", "scanner": "scanner-primary", "fingerprint": "93c32981403e00c3", "layer": "quality", "severity": "medium", "confidence": 1.0, "tags": ["integrity", "fragile-runtime", "robustness"]}}, {"ruleId": "scanner-625af0b2198ea743", "level": "none", "message": {"text": "Commented-code block (7 lines) in scripts/reprocess-sessions.py:480"}, "properties": {"repobilityId": "77f4dbf747809739", "scanner": "scanner-primary", "fingerprint": "625af0b2198ea743", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-5f8ae9e5bf081884", "level": "none", "message": {"text": "Commented-code block (5 lines) in scripts/backfill-embeddings.py:215"}, "properties": {"repobilityId": "d1ce1ccd407679c0", "scanner": "scanner-primary", "fingerprint": "5f8ae9e5bf081884", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-e7c67da1c949da5d", "level": "none", "message": {"text": "Commented-code block (6 lines) in scripts/dedup-memories.py:345"}, "properties": {"repobilityId": "35ecda8c2e8d9fb7", "scanner": "scanner-primary", "fingerprint": "e7c67da1c949da5d", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-7690138e08a085a7", "level": "note", "message": {"text": "Legacy-named symbol `skipped_legacy` in scripts/sync-to-zotero.py:175"}, "properties": {"repobilityId": "5015591aa6c0d3a4", "scanner": "scanner-primary", "fingerprint": "7690138e08a085a7", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "legacy-marker", "dead-code"]}}, {"ruleId": "scanner-3d0497d85db51501", "level": "none", "message": {"text": "Commented-code block (5 lines) in scripts/sync-to-zotero.py:54"}, "properties": {"repobilityId": "c48342817f697456", "scanner": "scanner-primary", "fingerprint": "3d0497d85db51501", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-f8fd3a4ad1e4316f", "level": "none", "message": {"text": "Commented-code block (5 lines) in scripts/anchor_verify.py:443"}, "properties": {"repobilityId": "2517cd8114d42e52", "scanner": "scanner-primary", "fingerprint": "f8fd3a4ad1e4316f", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-8492ea91648d78f1", "level": "none", "message": {"text": "Commented-code block (10 lines) in scripts/style-analyser/phase3_promotion.py:46"}, "properties": {"repobilityId": "5fda3e56cd574c27", "scanner": "scanner-primary", "fingerprint": "8492ea91648d78f1", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-d6be29d8894eba6d", "level": "none", "message": {"text": "Commented-code block (6 lines) in scripts/style-analyser/extract_corpus.py:64"}, "properties": {"repobilityId": "37fa748c1cf219ca", "scanner": "scanner-primary", "fingerprint": "d6be29d8894eba6d", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-cea977b4f8de767a", "level": "none", "message": {"text": "Commented-code block (5 lines) in scripts/style-analyser/phase1_pipeline.py:101"}, "properties": {"repobilityId": "81e8eda9727a2472", "scanner": "scanner-primary", "fingerprint": "cea977b4f8de767a", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-e83e184b21143261", "level": "none", "message": {"text": "Commented-code block (8 lines) in scripts/style-analyser/efficacy_build_prompts.py:87"}, "properties": {"repobilityId": "c342a652ee591536", "scanner": "scanner-primary", "fingerprint": "e83e184b21143261", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-30de01271294b50e", "level": "none", "message": {"text": "Commented-code block (6 lines) in scripts/style-analyser/phase5_evaluator.py:117"}, "properties": {"repobilityId": "10380f8f53e8c7ac", "scanner": "scanner-primary", "fingerprint": "30de01271294b50e", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-1851203708686574", "level": "none", "message": {"text": "Commented-code block (5 lines) in scripts/style-analyser/validate_announce_colon.py:224"}, "properties": {"repobilityId": "0add80ab7edb9a33", "scanner": "scanner-primary", "fingerprint": "1851203708686574", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-7fb05ad061a8075c", "level": "none", "message": {"text": "Commented-code block (5 lines) in hooks/session-start-retrieval.py:50"}, "properties": {"repobilityId": "f566c897bbba96df", "scanner": "scanner-primary", "fingerprint": "7fb05ad061a8075c", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-2893e23552f2d202", "level": "none", "message": {"text": "Commented-code block (8 lines) in hooks/session-start-accountability.py:86"}, "properties": {"repobilityId": "2b1c3048c1427481", "scanner": "scanner-primary", "fingerprint": "2893e23552f2d202", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-8f62d6f4cc1c7849", "level": "none", "message": {"text": "Commented-code block (5 lines) in hooks/session-start-code-state.py:40"}, "properties": {"repobilityId": "ee7d75c9e30c5af2", "scanner": "scanner-primary", "fingerprint": "8f62d6f4cc1c7849", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-05eba06d838dbfaa", "level": "none", "message": {"text": "Commented-code block (6 lines) in hooks/extraction-hook.py:53"}, "properties": {"repobilityId": "5a0e820caf4be2a0", "scanner": "scanner-primary", "fingerprint": "05eba06d838dbfaa", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-be46ea126aa5d8dc", "level": "note", "message": {"text": "Near-duplicate function bodies in 3 places"}, "properties": {"repobilityId": "161f1f44e882bd0a", "scanner": "scanner-primary", "fingerprint": "be46ea126aa5d8dc", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}, {"ruleId": "scanner-be46ea126aa5d8dc", "level": "note", "message": {"text": "Near-duplicate function bodies in 3 places"}, "properties": {"repobilityId": "0ef0732effa7cc4d", "scanner": "scanner-primary", "fingerprint": "be46ea126aa5d8dc", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}, {"ruleId": "scanner-be46ea126aa5d8dc", "level": "note", "message": {"text": "Near-duplicate function bodies in 3 places"}, "properties": {"repobilityId": "9a6a336104987cf0", "scanner": "scanner-primary", "fingerprint": "be46ea126aa5d8dc", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}, {"ruleId": "scanner-2c04133e54348533", "level": "note", "message": {"text": "Near-duplicate function bodies in 2 places"}, "properties": {"repobilityId": "64ce136c0c49b9d2", "scanner": "scanner-primary", "fingerprint": "2c04133e54348533", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}, {"ruleId": "scanner-2c04133e54348533", "level": "note", "message": {"text": "Near-duplicate function bodies in 2 places"}, "properties": {"repobilityId": "7b2db0208570dcc3", "scanner": "scanner-primary", "fingerprint": "2c04133e54348533", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}, {"ruleId": "scanner-2c04133e54348533", "level": "note", "message": {"text": "Near-duplicate function bodies in 2 places"}, "properties": {"repobilityId": "2e8be14c15636240", "scanner": "scanner-primary", "fingerprint": "2c04133e54348533", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}, {"ruleId": "scanner-2c04133e54348533", "level": "note", "message": {"text": "Near-duplicate function bodies in 2 places"}, "properties": {"repobilityId": "29dab4d341093907", "scanner": "scanner-primary", "fingerprint": "2c04133e54348533", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}]}]}