{"version": "2.1.0", "$schema": "https://json.schemastore.org/sarif-2.1.0.json", "runs": [{"tool": {"driver": {"name": "Repobility", "informationUri": "https://repobility.com", "rules": [{"id": "scanner-792337abb9ad0cce", "name": "Possibly dead Python function: array_to_rgba", "shortDescription": {"text": "Possibly dead Python function: array_to_rgba"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-fbe229b6d2fddcbc", "name": "Possibly dead Python function: tip", "shortDescription": {"text": "Possibly dead Python function: tip"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-f91f06f4b5e6696d", "name": "Possibly dead Python function: reset_zoom", "shortDescription": {"text": "Possibly dead Python function: reset_zoom"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-4dab1ce22338d8da", "name": "Possibly dead Python function: set_show_markers", "shortDescription": {"text": "Possibly dead Python function: set_show_markers"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-faf72820e9d5db23", "name": "Possibly dead Python function: set_active_roi_id", "shortDescription": {"text": "Possibly dead Python function: set_active_roi_id"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-99e3119353336f5d", "name": "Possibly dead Python function: add_roi_item", "shortDescription": {"text": "Possibly dead Python function: add_roi_item"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-1dc136bbe1216cf7", "name": "Possibly dead Python function: set_selection_tool", "shortDescription": {"text": "Possibly dead Python function: set_selection_tool"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-bf51ad5560d1f461", "name": "Possibly dead Python function: contextMenuEvent", "shortDescription": {"text": "Possibly dead Python function: contextMenuEvent"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-b94d4cee54e1b640", "name": "Possibly dead Python function: thumbnail_channel", "shortDescription": {"text": "Possibly dead Python function: thumbnail_channel"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-c7ae813470102644", "name": "Possibly dead Python function: thumbnail_processing", "shortDescription": {"text": "Possibly dead Python function: thumbnail_processing"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-dd1a3f203e063f91", "name": "Possibly dead Python function: set_filter_mode", "shortDescription": {"text": "Possibly dead Python function: set_filter_mode"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-26465ca84c63cf43", "name": "Possibly dead Python function: contextMenuEvent", "shortDescription": {"text": "Possibly dead Python function: contextMenuEvent"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-2b7376ce170a90ee", "name": "Possibly dead Python function: set_custom_length_nm", "shortDescription": {"text": "Possibly dead Python function: set_custom_length_nm"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-b4acd985f04cbb8f", "name": "Possibly dead Python function: set_clip_text", "shortDescription": {"text": "Possibly dead Python function: set_clip_text"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-9a2d1bf8d968ca71", "name": "Possibly dead Python function: restore_points", "shortDescription": {"text": "Possibly dead Python function: restore_points"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-842b647e023d98af", "name": "Possibly dead Python function: is_open", "shortDescription": {"text": "Possibly dead Python function: is_open"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-79de43136d1e2064", "name": "Possibly dead Python function: panel", "shortDescription": {"text": "Possibly dead Python function: panel"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-8bd926933aecc325", "name": "Possibly dead Python function: dismiss_all", "shortDescription": {"text": "Possibly dead Python function: dismiss_all"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-bb177c6fa2211d14", "name": "Possibly dead Python function: add_selected_step_height_measurement", "shortDescription": {"text": "Possibly dead Python function: add_selected_step_height_measurement"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-8a35a4bd12eaa8ac", "name": "Possibly dead Python function: add_current_line_profile_measurement", "shortDescription": {"text": "Possibly dead Python function: add_current_line_profile_measurement"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-b3d291dc8c99e9f7", "name": "Possibly dead Python function: add_current_line_profile_delta_measurement", "shortDescription": {"text": "Possibly dead Python function: add_current_line_profile_delta_measurement"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-264cd349e51ce0f8", "name": "Possibly dead Python function: detect_feature_maxima_for_active_roi", "shortDescription": {"text": "Possibly dead Python function: detect_feature_maxima_for_active_roi"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-1ca0fb88a51365de", "name": "Possibly dead Python function: result_count", "shortDescription": {"text": "Possibly dead Python function: result_count"}, "fullDescription": {"text": "No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-be215e9465761ffb", "name": "File has no detected symbols: probeflow/cli/_legacy.py", "shortDescription": {"text": "File has no detected symbols: probeflow/cli/_legacy.py"}, "fullDescription": {"text": "Source file with no class/function declarations \u2014 possible config, dead code, or scratch file."}, "properties": {"scanner": "scanner-primary", "layer": "software", "severity": "low", "confidence": 1.0}}, {"id": "scanner-9710c8d059e53154", "name": "No frontend routes/components detected", "shortDescription": {"text": "No frontend routes/components detected"}, "fullDescription": {"text": "No React/Vue/Next routes were found. This is fine for backend-only repos."}, "properties": {"scanner": "scanner-primary", "layer": "frontend", "severity": "info", "confidence": 1.0}}, {"id": "scanner-6372cebde0220094", "name": "No auth library detected", "shortDescription": {"text": "No auth library detected"}, "fullDescription": {"text": "The scanner did not find any standard auth library (JWT, OAuth, NextAuth, Auth0, etc.). The repo has auth/admin/session surface indicators, so auth may live in custom code, in a separate service, or be missing."}, "properties": {"scanner": "scanner-primary", "layer": "security", "severity": "medium", "confidence": 1.0}}, {"id": "scanner-27924aa79fa4a517", "name": "GitHub Action is tag-pinned rather than SHA-pinned", "shortDescription": {"text": "GitHub Action is tag-pinned rather than SHA-pinned"}, "fullDescription": {"text": "actions/setup-python@v5 can move without a code change in this repo. Pin third-party actions to a reviewed 40-character commit SHA."}, "properties": {"scanner": "scanner-primary", "layer": "cicd", "severity": "low", "confidence": 1.0}}, {"id": "scanner-3a637a7c0fc4c734", "name": "Very large file: tests/test_processing.py (1538 lines)", "shortDescription": {"text": "Very large file: tests/test_processing.py (1538 lines)"}, "fullDescription": {"text": "Files with >800 lines often hide complexity hotspots and discourage tests."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-019a725461ba485e", "name": "Very large file: tests/test_processing_physics.py (1155 lines)", "shortDescription": {"text": "Very large file: tests/test_processing_physics.py (1155 lines)"}, "fullDescription": {"text": "Files with >800 lines often hide complexity hotspots and discourage tests."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-2bcca626fe954029", "name": "Very large file: tests/test_gui_processing_panel.py (2262 lines)", "shortDescription": {"text": "Very large file: tests/test_gui_processing_panel.py (2262 lines)"}, "fullDescription": {"text": "Files with >800 lines often hide complexity hotspots and discourage tests."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-a0c56fc31583ef38", "name": "Very large file: probeflow/processing/state.py (1253 lines)", "shortDescription": {"text": "Very large file: probeflow/processing/state.py (1253 lines)"}, "fullDescription": {"text": "Files with >800 lines often hide complexity hotspots and discourage tests."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-bae07829d7281578", "name": "Very large file: probeflow/gui/app.py (1753 lines)", "shortDescription": {"text": "Very large file: probeflow/gui/app.py (1753 lines)"}, "fullDescription": {"text": "Files with >800 lines often hide complexity hotspots and discourage tests."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-76fcf0226611589f", "name": "Very large file: probeflow/gui/image_canvas.py (1538 lines)", "shortDescription": {"text": "Very large file: probeflow/gui/image_canvas.py (1538 lines)"}, "fullDescription": {"text": "Files with >800 lines often hide complexity hotspots and discourage tests."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-e5d183d8017c1013", "name": "Very large file: probeflow/gui/spec_viewer/single.py (1245 lines)", "shortDescription": {"text": "Very large file: probeflow/gui/spec_viewer/single.py (1245 lines)"}, "fullDescription": {"text": "Files with >800 lines often hide complexity hotspots and discourage tests."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-f00d381df1d64298", "name": "Very large file: probeflow/gui/features/__init__.py (2418 lines)", "shortDescription": {"text": "Very large file: probeflow/gui/features/__init__.py (2418 lines)"}, "fullDescription": {"text": "Files with >800 lines often hide complexity hotspots and discourage tests."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-b61aec61f34bc140", "name": "Very large file: probeflow/gui/dialogs/fft_viewer.py (1806 lines)", "shortDescription": {"text": "Very large file: probeflow/gui/dialogs/fft_viewer.py (1806 lines)"}, "fullDescription": {"text": "Files with >800 lines often hide complexity hotspots and discourage tests."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-802fd961fa83743b", "name": "Very large file: probeflow/gui/dialogs/definitions.py (2274 lines)", "shortDescription": {"text": "Very large file: probeflow/gui/dialogs/definitions.py (2274 lines)"}, "fullDescription": {"text": "Files with >800 lines often hide complexity hotspots and discourage tests."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-3ab5d313dda8e5f9", "name": "Debug logging residue appears in source files", "shortDescription": {"text": "Debug logging residue appears in source files"}, "fullDescription": {"text": "Found 106 console/debugger/print-style debug statements in non-test source. This is a common fast-generation residue before production cleanup."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-72b2a6250083a784", "name": "Placeholder or mock-heavy implementation detected", "shortDescription": {"text": "Placeholder or mock-heavy implementation detected"}, "fullDescription": {"text": "Found 28 placeholder/mock markers across 14 source files. This often means the repo looks complete while core flows still use generated scaffolding or fake data."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "medium", "confidence": 1.0}}, {"id": "scanner-2d0c7b7ab8f8aacf", "name": "Critical user flow still appears backed by mock or placeholder data", "shortDescription": {"text": "Critical user flow still appears backed by mock or placeholder data"}, "fullDescription": {"text": "A payment/auth/admin/order/billing-style flow contains mock, fake, TODO, dummy, or placeholder markers in runtime source. In the Fable corpus this is a high-leverage completeness smell: the app can look finished while the money, identity, or tenant flow is still scaffolded."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "medium", "confidence": 1.0}}, {"id": "scanner-ea8f3013f588db25", "name": "Shallow git history limits provenance confidence", "shortDescription": {"text": "Shallow git history limits provenance confidence"}, "fullDescription": {"text": "The repository is a shallow clone. Origin/evolution analysis cannot distinguish fresh generation, imported legacy code, or long-lived human code with high confidence."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-8424db9c75e04ba4", "name": "Very short observed git history", "shortDescription": {"text": "Very short observed git history"}, "fullDescription": {"text": "The repo has multiple source files but two or fewer visible commits. This is not a failure by itself, but it lowers confidence in evolution-based diagnosis."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-f13bc51ddeae92a0", "name": "Commented-code block (6 lines) in tests/test_scan_model_roundtrip.py:35", "shortDescription": {"text": "Commented-code block (6 lines) in tests/test_scan_model_roundtrip.py:35"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-587fe7787afb15bc", "name": "Legacy-named symbol `test_precomputed_mask_returned_as_copy` in tests/test_measurements_roi_resolve.py:23", "shortDescription": {"text": "Legacy-named symbol `test_precomputed_mask_returned_as_copy` in tests/test_measurements_roi_resolve.py:23"}, "fullDescription": {"text": "Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-0c65a7d960a9a38c", "name": "Legacy-named symbol `test_no_usable_adjacent_differences_returns_copy` in tests/test_processing.py:649", "shortDescription": {"text": "Legacy-named symbol `test_no_usable_adjacent_differences_returns_copy` in tests/test_processing.py:649"}, "fullDescription": {"text": "Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-7db038c587865933", "name": "Commented-code block (5 lines) in tests/test_processing.py:141", "shortDescription": {"text": "Commented-code block (5 lines) in tests/test_processing.py:141"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-39f5cd67eee601c5", "name": "Commented-code block (14 lines) in tests/conftest.py:106", "shortDescription": {"text": "Commented-code block (14 lines) in tests/conftest.py:106"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-4ed7dbb74188756f", "name": "Legacy-named symbol `par32_v2` in tests/test_spec_io.py:189", "shortDescription": {"text": "Legacy-named symbol `par32_v2` in tests/test_spec_io.py:189"}, "fullDescription": {"text": "Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-1a8c692cd3ac0a81", "name": "Legacy-named symbol `test_no_speed_and_no_extras_returns_copy` in tests/test_mains_pickup.py:322", "shortDescription": {"text": "Legacy-named symbol `test_no_speed_and_no_extras_returns_copy` in tests/test_mains_pickup.py:322"}, "fullDescription": {"text": "Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-26ce86cda30fcf53", "name": "Commented-code block (5 lines) in tests/test_measurements_formatting.py:117", "shortDescription": {"text": "Commented-code block (5 lines) in tests/test_measurements_formatting.py:117"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-d90173cf789abecc", "name": "Commented-code block (6 lines) in tests/test_gui_features.py:232", "shortDescription": {"text": "Commented-code block (6 lines) in tests/test_gui_features.py:232"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-6e7949a762d749ed", "name": "Commented-code block (5 lines) in tests/test_calibration_edge_cases.py:156", "shortDescription": {"text": "Commented-code block (5 lines) in tests/test_calibration_edge_cases.py:156"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-4f885d91c28ae069", "name": "Legacy-named symbol `m_old` in tests/test_inverse_fft.py:70", "shortDescription": {"text": "Legacy-named symbol `m_old` in tests/test_inverse_fft.py:70"}, "fullDescription": {"text": "Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-5d5055ae1f3a7579", "name": "Legacy-named symbol `nOld` in tests/test_sxm_processing_comment.py:100", "shortDescription": {"text": "Legacy-named symbol `nOld` in tests/test_sxm_processing_comment.py:100"}, "fullDescription": {"text": "Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-dd47d6291ef32c9d", "name": "Legacy-named symbol `c_x_old` in tests/test_bragg_calibration.py:313", "shortDescription": {"text": "Legacy-named symbol `c_x_old` in tests/test_bragg_calibration.py:313"}, "fullDescription": {"text": "Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-be7cc2f8fa9aca77", "name": "Commented-code block (6 lines) in tests/test_step_edges.py:233", "shortDescription": {"text": "Commented-code block (6 lines) in tests/test_step_edges.py:233"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-e4ba2f9c08661438", "name": "Commented-code block (7 lines) in probeflow/processing/bragg.py:257", "shortDescription": {"text": "Commented-code block (7 lines) in probeflow/processing/bragg.py:257"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-55c62876c39ac423", "name": "Commented-code block (5 lines) in probeflow/processing/mains_pickup.py:356", "shortDescription": {"text": "Commented-code block (5 lines) in probeflow/processing/mains_pickup.py:356"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-49a206d9d1ef6991", "name": "Commented-code block (5 lines) in probeflow/processing/geometry.py:116", "shortDescription": {"text": "Commented-code block (5 lines) in probeflow/processing/geometry.py:116"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-85f22b4b709a4dff", "name": "Commented-code block (9 lines) in probeflow/processing/background.py:259", "shortDescription": {"text": "Commented-code block (9 lines) in probeflow/processing/background.py:259"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-d99e0ccac3e8f070", "name": "Commented-code block (8 lines) in probeflow/processing/filters.py:24", "shortDescription": {"text": "Commented-code block (8 lines) in probeflow/processing/filters.py:24"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-e4f56fc29cc9b73c", "name": "Commented-code block (5 lines) in probeflow/processing/gui_adapter.py:55", "shortDescription": {"text": "Commented-code block (5 lines) in probeflow/processing/gui_adapter.py:55"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-9c09f1c27e55d38d", "name": "Commented-code block (5 lines) in probeflow/processing/bad_lines.py:291", "shortDescription": {"text": "Commented-code block (5 lines) in probeflow/processing/bad_lines.py:291"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-a0fb18a16af14f4b", "name": "Commented-code block (10 lines) in probeflow/processing/state.py:549", "shortDescription": {"text": "Commented-code block (10 lines) in probeflow/processing/state.py:549"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-ebe454da3b4f6018", "name": "Commented-code block (9 lines) in probeflow/processing/alignment.py:52", "shortDescription": {"text": "Commented-code block (9 lines) in probeflow/processing/alignment.py:52"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-ff9780972142ff9b", "name": "Legacy-named symbol `u_old` in probeflow/processing/tv.py:136", "shortDescription": {"text": "Legacy-named symbol `u_old` in probeflow/processing/tv.py:136"}, "fullDescription": {"text": "Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-8a310845871ba5dd", "name": "Commented-code block (6 lines) in probeflow/processing/tv.py:127", "shortDescription": {"text": "Commented-code block (6 lines) in probeflow/processing/tv.py:127"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-927afb50862db133", "name": "Commented-code block (8 lines) in probeflow/processing/edge_detection.py:168", "shortDescription": {"text": "Commented-code block (8 lines) in probeflow/processing/edge_detection.py:168"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-351b40229dd47e1c", "name": "Commented-code block (5 lines) in probeflow/gui/app.py:121", "shortDescription": {"text": "Commented-code block (5 lines) in probeflow/gui/app.py:121"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-b45a66e43bdd382b", "name": "Network/subprocess call without timeout or try/except \u2014 probeflow/gui/app.py:1666", "shortDescription": {"text": "Network/subprocess call without timeout or try/except \u2014 probeflow/gui/app.py:1666"}, "fullDescription": {"text": "`subprocess.Popen(...)` here lacks both a `timeout=` arg and an enclosing try/except. This is exactly the class of bug that took down our git-clone earlier (HTTP/2 stream cancel surfaced as a fatal). Add a `timeout=` and wrap in try/except, or use a wrapper that retries."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "medium", "confidence": 1.0}}, {"id": "scanner-f79d28f7d14bf8df", "name": "Commented-code block (6 lines) in probeflow/gui/workers.py:315", "shortDescription": {"text": "Commented-code block (6 lines) in probeflow/gui/workers.py:315"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-59a6616d3c72b5b5", "name": "Commented-code block (5 lines) in probeflow/gui/roi_items.py:142", "shortDescription": {"text": "Commented-code block (5 lines) in probeflow/gui/roi_items.py:142"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-eff63f6edff3ba8c", "name": "Commented-code block (6 lines) in probeflow/gui/image_canvas.py:234", "shortDescription": {"text": "Commented-code block (6 lines) in probeflow/gui/image_canvas.py:234"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-4632bf1898d9bb6b", "name": "Legacy-named symbol `lattice_structures_v1` in probeflow/gui/lattice_correction_ui.py:11", "shortDescription": {"text": "Legacy-named symbol `lattice_structures_v1` in probeflow/gui/lattice_correction_ui.py:11"}, "fullDescription": {"text": "Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-1f1547c56fec6c53", "name": "Commented-code block (5 lines) in probeflow/gui/browse/thumbnail_grid.py:31", "shortDescription": {"text": "Commented-code block (5 lines) in probeflow/gui/browse/thumbnail_grid.py:31"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-bb530c4db16d0e8a", "name": "Commented-code block (5 lines) in probeflow/gui/lattice_grid/fft_overlay.py:192", "shortDescription": {"text": "Commented-code block (5 lines) in probeflow/gui/lattice_grid/fft_overlay.py:192"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-f8c37f697dfe63d0", "name": "Legacy-named symbol `_on_canvas_roi_copy` in probeflow/gui/viewer/image_viewer_roi_mixin.py:333", "shortDescription": {"text": "Legacy-named symbol `_on_canvas_roi_copy` in probeflow/gui/viewer/image_viewer_roi_mixin.py:333"}, "fullDescription": {"text": "Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-979e81f530aab184", "name": "Commented-code block (5 lines) in probeflow/gui/viewer/window_menu.py:73", "shortDescription": {"text": "Commented-code block (5 lines) in probeflow/gui/viewer/window_menu.py:73"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-278040cdee78e009", "name": "Commented-code block (5 lines) in probeflow/gui/viewer/image_viewer_display_mixin.py:309", "shortDescription": {"text": "Commented-code block (5 lines) in probeflow/gui/viewer/image_viewer_display_mixin.py:309"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-76da0494b2b07683", "name": "Legacy-named symbol `act_copy` in probeflow/gui/viewer/context_menus.py:85", "shortDescription": {"text": "Legacy-named symbol `act_copy` in probeflow/gui/viewer/context_menus.py:85"}, "fullDescription": {"text": "Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-2a6e0fe7e6d82db3", "name": "Commented-code block (5 lines) in probeflow/gui/viewer/image_viewer_processing_export_mixin.py:523", "shortDescription": {"text": "Commented-code block (5 lines) in probeflow/gui/viewer/image_viewer_processing_export_mixin.py:523"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-284203b6e068e46c", "name": "Commented-code block (5 lines) in probeflow/gui/viewer/image_viewer_tools_mixin.py:199", "shortDescription": {"text": "Commented-code block (5 lines) in probeflow/gui/viewer/image_viewer_tools_mixin.py:199"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-6b889d52710c20d5", "name": "Commented-code block (5 lines) in probeflow/gui/widgets/image_measurements_panel.py:68", "shortDescription": {"text": "Commented-code block (5 lines) in probeflow/gui/widgets/image_measurements_panel.py:68"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-f27aea6aab46f57f", "name": "Network/subprocess call without timeout or try/except \u2014 probeflow/gui/terminal/__init__.py:339", "shortDescription": {"text": "Network/subprocess call without timeout or try/except \u2014 probeflow/gui/terminal/__init__.py:339"}, "fullDescription": {"text": "`subprocess.Popen(...)` here lacks both a `timeout=` arg and an enclosing try/except. This is exactly the class of bug that took down our git-clone earlier (HTTP/2 stream cancel surfaced as a fatal). Add a `timeout=` and wrap in try/except, or use a wrapper that retries."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "medium", "confidence": 1.0}}, {"id": "scanner-869b7553282835b7", "name": "Commented-code block (9 lines) in probeflow/gui/features/__init__.py:407", "shortDescription": {"text": "Commented-code block (9 lines) in probeflow/gui/features/__init__.py:407"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-dfde459aea7769f1", "name": "Commented-code block (6 lines) in probeflow/gui/features/controller.py:259", "shortDescription": {"text": "Commented-code block (6 lines) in probeflow/gui/features/controller.py:259"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-cf45fcb2a221d003", "name": "Commented-code block (6 lines) in probeflow/gui/features/window.py:77", "shortDescription": {"text": "Commented-code block (6 lines) in probeflow/gui/features/window.py:77"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-379b09cbdda41100", "name": "Commented-code block (6 lines) in probeflow/gui/dialogs/image_viewer.py:156", "shortDescription": {"text": "Commented-code block (6 lines) in probeflow/gui/dialogs/image_viewer.py:156"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-63591a4ab3119df3", "name": "Commented-code block (6 lines) in probeflow/gui/dialogs/fft_viewer.py:783", "shortDescription": {"text": "Commented-code block (6 lines) in probeflow/gui/dialogs/fft_viewer.py:783"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-9e0f1f58b9f73ff9", "name": "Commented-code block (7 lines) in probeflow/gui/dialogs/fft_viewer_lattice_mixin.py:283", "shortDescription": {"text": "Commented-code block (7 lines) in probeflow/gui/dialogs/fft_viewer_lattice_mixin.py:283"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-4a2f76acedb8379e", "name": "Legacy-named symbol `_on_canvas_roi_copy` in probeflow/gui/dialogs/image_viewer_build_mixin.py:774", "shortDescription": {"text": "Legacy-named symbol `_on_canvas_roi_copy` in probeflow/gui/dialogs/image_viewer_build_mixin.py:774"}, "fullDescription": {"text": "Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-0cd3a64a0db5da47", "name": "Commented-code block (5 lines) in probeflow/gui/dialogs/fft_viewer_mains_mixin.py:183", "shortDescription": {"text": "Commented-code block (5 lines) in probeflow/gui/dialogs/fft_viewer_mains_mixin.py:183"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-ca8a5e918025ca12", "name": "Commented-code block (6 lines) in probeflow/cli/commands/processing.py:77", "shortDescription": {"text": "Commented-code block (6 lines) in probeflow/cli/commands/processing.py:77"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-2c0a777105925496", "name": "Commented-code block (7 lines) in probeflow/analysis/lattice.py:457", "shortDescription": {"text": "Commented-code block (7 lines) in probeflow/analysis/lattice.py:457"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-dcc543520a304088", "name": "Commented-code block (8 lines) in probeflow/analysis/line_periodicity.py:197", "shortDescription": {"text": "Commented-code block (8 lines) in probeflow/analysis/line_periodicity.py:197"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-5a80ce4b926be806", "name": "Commented-code block (6 lines) in probeflow/analysis/roi_statistics.py:57", "shortDescription": {"text": "Commented-code block (6 lines) in probeflow/analysis/roi_statistics.py:57"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-5707de3e853cfe67", "name": "Commented-code block (6 lines) in probeflow/analysis/features.py:568", "shortDescription": {"text": "Commented-code block (6 lines) in probeflow/analysis/features.py:568"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-a920d42f5c5866ca", "name": "Commented-code block (6 lines) in probeflow/analysis/grains.py:54", "shortDescription": {"text": "Commented-code block (6 lines) in probeflow/analysis/grains.py:54"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-eb868c751704f5bf", "name": "Commented-code block (8 lines) in probeflow/analysis/spec_plot.py:314", "shortDescription": {"text": "Commented-code block (8 lines) in probeflow/analysis/spec_plot.py:314"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-b41e40651a0d9125", "name": "Commented-code block (8 lines) in probeflow/analysis/feature_finder.py:17", "shortDescription": {"text": "Commented-code block (8 lines) in probeflow/analysis/feature_finder.py:17"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-67817803d4220568", "name": "Commented-code block (5 lines) in probeflow/io/mask_sidecar.py:94", "shortDescription": {"text": "Commented-code block (5 lines) in probeflow/io/mask_sidecar.py:94"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-58b66b9ca89c2b8b", "name": "Legacy-named symbol `stem_legacy` in probeflow/io/roi_sidecar.py:41", "shortDescription": {"text": "Legacy-named symbol `stem_legacy` in probeflow/io/roi_sidecar.py:41"}, "fullDescription": {"text": "Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-6679c4812243cb23", "name": "Commented-code block (7 lines) in probeflow/io/roi_sidecar.py:103", "shortDescription": {"text": "Commented-code block (7 lines) in probeflow/io/roi_sidecar.py:103"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-0d5d17106b6de7ee", "name": "Commented-code block (5 lines) in probeflow/io/converters/createc_dat_to_sxm.py:240", "shortDescription": {"text": "Commented-code block (5 lines) in probeflow/io/converters/createc_dat_to_sxm.py:240"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-1adf07eb4b5d9db4", "name": "Commented-code block (8 lines) in probeflow/io/readers/createc_dat.py:40", "shortDescription": {"text": "Commented-code block (8 lines) in probeflow/io/readers/createc_dat.py:40"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-fd2917a4deb74f3c", "name": "Commented-code block (5 lines) in probeflow/core/metadata.py:270", "shortDescription": {"text": "Commented-code block (5 lines) in probeflow/core/metadata.py:270"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-7b7a3d151aa80048", "name": "Commented-code block (5 lines) in probeflow/core/file_type.py:100", "shortDescription": {"text": "Commented-code block (5 lines) in probeflow/core/file_type.py:100"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-3a992a3df8c1f528", "name": "Commented-code block (6 lines) in probeflow/core/indexing.py:451", "shortDescription": {"text": "Commented-code block (6 lines) in probeflow/core/indexing.py:451"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-83a251de417440fc", "name": "Commented-code block (11 lines) in probeflow/core/scan_model.py:199", "shortDescription": {"text": "Commented-code block (11 lines) in probeflow/core/scan_model.py:199"}, "fullDescription": {"text": "A long run of `//` or `#` lines usually means abandoned code. Delete or move to git history. Keeps the canvas + dead-code detection honest."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "info", "confidence": 1.0}}, {"id": "scanner-2c04133e54348533", "name": "Near-duplicate function bodies in 2 places", "shortDescription": {"text": "Near-duplicate function bodies in 2 places"}, "fullDescription": {"text": "Functions with the same first-5-line body hash:\nprobeflow/measurements/export.py:measurements_to_csv_text, probeflow/measurements/export.py:measurements_to_csv\n\nThis is *the* AI-coder failure mode (4\u00d7 more duplication in vibe-coded repos \u2014 see https://jw.hn/ai-code-hygiene). Consolidate or document why they're separate."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-76a2f6818267a9a8", "name": "Near-duplicate function bodies in 8 places", "shortDescription": {"text": "Near-duplicate function bodies in 8 places"}, "fullDescription": {"text": "Functions with the same first-5-line body hash:\nprobeflow/gui/workers.py:work, probeflow/gui/workers.py:work, probeflow/gui/workers.py:work, probeflow/gui/workers.py:work\n\nThis is *the* AI-coder failure mode (4\u00d7 more duplication in vibe-coded repos \u2014 see https://jw.hn/ai-code-hygiene). Consolidate or document why they're separate."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}, {"id": "scanner-be46ea126aa5d8dc", "name": "Near-duplicate function bodies in 3 places", "shortDescription": {"text": "Near-duplicate function bodies in 3 places"}, "fullDescription": {"text": "Functions with the same first-5-line body hash:\nprobeflow/gui/models.py:from_index_item, probeflow/gui/models.py:from_index_item, probeflow/gui/models.py:from_index\n\nThis is *the* AI-coder failure mode (4\u00d7 more duplication in vibe-coded repos \u2014 see https://jw.hn/ai-code-hygiene). Consolidate or document why they're separate."}, "properties": {"scanner": "scanner-primary", "layer": "quality", "severity": "low", "confidence": 1.0}}]}}, "automationDetails": {"id": "repobility/20133"}, "properties": {"repository": "SPMQT-Lab/ProbeFlow", "repoUrl": "https://github.com/SPMQT-Lab/ProbeFlow", "branch": "main"}, "results": [{"ruleId": "scanner-792337abb9ad0cce", "level": "note", "message": {"text": "Possibly dead Python function: array_to_rgba"}, "properties": {"repobilityId": "de384c0fb53c4a17", "scanner": "scanner-primary", "fingerprint": "792337abb9ad0cce", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "probeflow/processing/display.py:193"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-fbe229b6d2fddcbc", "level": "note", "message": {"text": "Possibly dead Python function: tip"}, "properties": {"repobilityId": "9e81b3f1acf31cfb", "scanner": "scanner-primary", "fingerprint": "fbe229b6d2fddcbc", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "probeflow/gui/_tooltips.py:8"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-f91f06f4b5e6696d", "level": "note", "message": {"text": "Possibly dead Python function: reset_zoom"}, "properties": {"repobilityId": "bd4283d2cd96f7d4", "scanner": "scanner-primary", "fingerprint": "f91f06f4b5e6696d", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "probeflow/gui/image_canvas.py:341"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-4dab1ce22338d8da", "level": "note", "message": {"text": "Possibly dead Python function: set_show_markers"}, "properties": {"repobilityId": "4e729ac7db8104a7", "scanner": "scanner-primary", "fingerprint": "4dab1ce22338d8da", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "probeflow/gui/image_canvas.py:412"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-faf72820e9d5db23", "level": "note", "message": {"text": "Possibly dead Python function: set_active_roi_id"}, "properties": {"repobilityId": "e7794b9c60c93939", "scanner": "scanner-primary", "fingerprint": "faf72820e9d5db23", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "probeflow/gui/image_canvas.py:567"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-99e3119353336f5d", "level": "note", "message": {"text": "Possibly dead Python function: add_roi_item"}, "properties": {"repobilityId": "ee34c64567b6ec6d", "scanner": "scanner-primary", "fingerprint": "99e3119353336f5d", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "probeflow/gui/image_canvas.py:614"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-1dc136bbe1216cf7", "level": "note", "message": {"text": "Possibly dead Python function: set_selection_tool"}, "properties": {"repobilityId": "3acae504ce00d79b", "scanner": "scanner-primary", "fingerprint": "1dc136bbe1216cf7", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "probeflow/gui/image_canvas.py:682"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-bf51ad5560d1f461", "level": "note", "message": {"text": "Possibly dead Python function: contextMenuEvent"}, "properties": {"repobilityId": "43f38c0eb5d6be24", "scanner": "scanner-primary", "fingerprint": "bf51ad5560d1f461", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "probeflow/gui/image_canvas.py:1532"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-b94d4cee54e1b640", "level": "note", "message": {"text": "Possibly dead Python function: thumbnail_channel"}, "properties": {"repobilityId": "6343c3c6ad9c8f0c", "scanner": "scanner-primary", "fingerprint": "b94d4cee54e1b640", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "probeflow/gui/browse/thumbnail_grid.py:613"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-c7ae813470102644", "level": "note", "message": {"text": "Possibly dead Python function: thumbnail_processing"}, "properties": {"repobilityId": "a484ca05102cab52", "scanner": "scanner-primary", "fingerprint": "c7ae813470102644", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "probeflow/gui/browse/thumbnail_grid.py:619"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-dd1a3f203e063f91", "level": "note", "message": {"text": "Possibly dead Python function: set_filter_mode"}, "properties": {"repobilityId": "ade8780cb0161688", "scanner": "scanner-primary", "fingerprint": "dd1a3f203e063f91", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "probeflow/gui/browse/panels.py:245"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-26465ca84c63cf43", "level": "note", "message": {"text": "Possibly dead Python function: contextMenuEvent"}, "properties": {"repobilityId": "43f38c0eb5d6be24", "scanner": "scanner-primary", "fingerprint": "26465ca84c63cf43", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "probeflow/gui/browse/cards.py:270"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-2b7376ce170a90ee", "level": "note", "message": {"text": "Possibly dead Python function: set_custom_length_nm"}, "properties": {"repobilityId": "1d19bac1c087f882", "scanner": "scanner-primary", "fingerprint": "2b7376ce170a90ee", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "probeflow/gui/viewer/widgets.py:160"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-b4acd985f04cbb8f", "level": "note", "message": {"text": "Possibly dead Python function: set_clip_text"}, "properties": {"repobilityId": "6ea2818981dbeea6", "scanner": "scanner-primary", "fingerprint": "b4acd985f04cbb8f", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "probeflow/gui/viewer/histogram.py:314"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-9a2d1bf8d968ca71", "level": "note", "message": {"text": "Possibly dead Python function: restore_points"}, "properties": {"repobilityId": "2a84419715c8713d", "scanner": "scanner-primary", "fingerprint": "9a2d1bf8d968ca71", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "probeflow/gui/viewer/set_zero_plane.py:31"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-842b647e023d98af", "level": "note", "message": {"text": "Possibly dead Python function: is_open"}, "properties": {"repobilityId": "44979f45789e6182", "scanner": "scanner-primary", "fingerprint": "842b647e023d98af", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "probeflow/gui/viewer/floating_panel.py:161"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-79de43136d1e2064", "level": "note", "message": {"text": "Possibly dead Python function: panel"}, "properties": {"repobilityId": "3bb15088e3378e27", "scanner": "scanner-primary", "fingerprint": "79de43136d1e2064", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "probeflow/gui/viewer/floating_panel.py:164"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-8bd926933aecc325", "level": "note", "message": {"text": "Possibly dead Python function: dismiss_all"}, "properties": {"repobilityId": "2a78006b51fabd61", "scanner": "scanner-primary", "fingerprint": "8bd926933aecc325", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "probeflow/gui/viewer/floating_panel.py:212"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-bb177c6fa2211d14", "level": "note", "message": {"text": "Possibly dead Python function: add_selected_step_height_measurement"}, "properties": {"repobilityId": "32a67f7348cacb52", "scanner": "scanner-primary", "fingerprint": "bb177c6fa2211d14", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "probeflow/gui/viewer/image_measurements.py:289"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-8a35a4bd12eaa8ac", "level": "note", "message": {"text": "Possibly dead Python function: add_current_line_profile_measurement"}, "properties": {"repobilityId": "9650b63501f3eb6f", "scanner": "scanner-primary", "fingerprint": "8a35a4bd12eaa8ac", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "probeflow/gui/viewer/image_measurements.py:325"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-b3d291dc8c99e9f7", "level": "note", "message": {"text": "Possibly dead Python function: add_current_line_profile_delta_measurement"}, "properties": {"repobilityId": "4ecb03a0ec021085", "scanner": "scanner-primary", "fingerprint": "b3d291dc8c99e9f7", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "probeflow/gui/viewer/image_measurements.py:590"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-264cd349e51ce0f8", "level": "note", "message": {"text": "Possibly dead Python function: detect_feature_maxima_for_active_roi"}, "properties": {"repobilityId": "8fcc6dc02e949da8", "scanner": "scanner-primary", "fingerprint": "264cd349e51ce0f8", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "probeflow/gui/viewer/image_measurements.py:661"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-1ca0fb88a51365de", "level": "note", "message": {"text": "Possibly dead Python function: result_count"}, "properties": {"repobilityId": "e2d1cac58cf75816", "scanner": "scanner-primary", "fingerprint": "1ca0fb88a51365de", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": "probeflow/gui/widgets/measurement_results_panel.py:15"}, "region": {"startLine": 1}}}]}, {"ruleId": "scanner-be215e9465761ffb", "level": "note", "message": {"text": "File has no detected symbols: probeflow/cli/_legacy.py"}, "properties": {"repobilityId": "01a6ee62ecd6dcf5", "scanner": "scanner-primary", "fingerprint": "be215e9465761ffb", "layer": "software", "severity": "low", "confidence": 1.0, "tags": ["dead-code-candidate"]}}, {"ruleId": "scanner-9710c8d059e53154", "level": "none", "message": {"text": "No frontend routes/components detected"}, "properties": {"repobilityId": "44ca61485762e494", "scanner": "scanner-primary", "fingerprint": "9710c8d059e53154", "layer": "frontend", "severity": "info", "confidence": 1.0, "tags": ["coverage"]}}, {"ruleId": "scanner-6372cebde0220094", "level": "warning", "message": {"text": "No auth library detected"}, "properties": {"repobilityId": "a5b6035a5bbf8054", "scanner": "scanner-primary", "fingerprint": "6372cebde0220094", "layer": "security", "severity": "medium", "confidence": 1.0, "tags": ["coverage", "auth"]}}, {"ruleId": "scanner-27924aa79fa4a517", "level": "note", "message": {"text": "GitHub Action is tag-pinned rather than SHA-pinned"}, "properties": {"repobilityId": "04f57d208548fcef", "scanner": "scanner-primary", "fingerprint": "27924aa79fa4a517", "layer": "cicd", "severity": "low", "confidence": 1.0, "tags": ["supply-chain", "github-actions", "pinned-dependencies"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": ".github/workflows/ci.yml"}, "region": {"startLine": 25}}}]}, {"ruleId": "scanner-27924aa79fa4a517", "level": "note", "message": {"text": "GitHub Action is tag-pinned rather than SHA-pinned"}, "properties": {"repobilityId": "04f57d208548fcef", "scanner": "scanner-primary", "fingerprint": "27924aa79fa4a517", "layer": "cicd", "severity": "low", "confidence": 1.0, "tags": ["supply-chain", "github-actions", "pinned-dependencies"]}, "locations": [{"physicalLocation": {"artifactLocation": {"uri": ".github/workflows/ci.yml"}, "region": {"startLine": 55}}}]}, {"ruleId": "scanner-3a637a7c0fc4c734", "level": "note", "message": {"text": "Very large file: tests/test_processing.py (1538 lines)"}, "properties": {"repobilityId": "769facd3653bec6c", "scanner": "scanner-primary", "fingerprint": "3a637a7c0fc4c734", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["complexity"]}}, {"ruleId": "scanner-019a725461ba485e", "level": "note", "message": {"text": "Very large file: tests/test_processing_physics.py (1155 lines)"}, "properties": {"repobilityId": "cef99819d27c4be3", "scanner": "scanner-primary", "fingerprint": "019a725461ba485e", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["complexity"]}}, {"ruleId": "scanner-2bcca626fe954029", "level": "note", "message": {"text": "Very large file: tests/test_gui_processing_panel.py (2262 lines)"}, "properties": {"repobilityId": "ef593dc28cb7ad91", "scanner": "scanner-primary", "fingerprint": "2bcca626fe954029", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["complexity"]}}, {"ruleId": "scanner-a0c56fc31583ef38", "level": "note", "message": {"text": "Very large file: probeflow/processing/state.py (1253 lines)"}, "properties": {"repobilityId": "9b85ff3fae50c98d", "scanner": "scanner-primary", "fingerprint": "a0c56fc31583ef38", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["complexity"]}}, {"ruleId": "scanner-bae07829d7281578", "level": "note", "message": {"text": "Very large file: probeflow/gui/app.py (1753 lines)"}, "properties": {"repobilityId": "1b97b273c9ae8525", "scanner": "scanner-primary", "fingerprint": "bae07829d7281578", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["complexity"]}}, {"ruleId": "scanner-76fcf0226611589f", "level": "note", "message": {"text": "Very large file: probeflow/gui/image_canvas.py (1538 lines)"}, "properties": {"repobilityId": "26364f89c465bc39", "scanner": "scanner-primary", "fingerprint": "76fcf0226611589f", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["complexity"]}}, {"ruleId": "scanner-e5d183d8017c1013", "level": "note", "message": {"text": "Very large file: probeflow/gui/spec_viewer/single.py (1245 lines)"}, "properties": {"repobilityId": "e94e9ed90e2e8493", "scanner": "scanner-primary", "fingerprint": "e5d183d8017c1013", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["complexity"]}}, {"ruleId": "scanner-f00d381df1d64298", "level": "note", "message": {"text": "Very large file: probeflow/gui/features/__init__.py (2418 lines)"}, "properties": {"repobilityId": "3ce19fe0fcf32fa8", "scanner": "scanner-primary", "fingerprint": "f00d381df1d64298", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["complexity"]}}, {"ruleId": "scanner-b61aec61f34bc140", "level": "note", "message": {"text": "Very large file: probeflow/gui/dialogs/fft_viewer.py (1806 lines)"}, "properties": {"repobilityId": "a7889dc27a72c885", "scanner": "scanner-primary", "fingerprint": "b61aec61f34bc140", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["complexity"]}}, {"ruleId": "scanner-802fd961fa83743b", "level": "note", "message": {"text": "Very large file: probeflow/gui/dialogs/definitions.py (2274 lines)"}, "properties": {"repobilityId": "db18e07fe60b9f46", "scanner": "scanner-primary", "fingerprint": "802fd961fa83743b", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["complexity"]}}, {"ruleId": "scanner-3ab5d313dda8e5f9", "level": "note", "message": {"text": "Debug logging residue appears in source files"}, "properties": {"repobilityId": "28d3f82069c9df59", "scanner": "scanner-primary", "fingerprint": "3ab5d313dda8e5f9", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["debug", "cleanup", "repo-hardening", "generated-repo-pattern"]}}, {"ruleId": "scanner-72b2a6250083a784", "level": "warning", "message": {"text": "Placeholder or mock-heavy implementation detected"}, "properties": {"repobilityId": "fb4b3512723d8827", "scanner": "scanner-primary", "fingerprint": "72b2a6250083a784", "layer": "quality", "severity": "medium", "confidence": 1.0, "tags": ["placeholder", "mock-data", "incomplete", "generated-repo-pattern"]}}, {"ruleId": "scanner-2d0c7b7ab8f8aacf", "level": "warning", "message": {"text": "Critical user flow still appears backed by mock or placeholder data"}, "properties": {"repobilityId": "d02d1962129d99c0", "scanner": "scanner-primary", "fingerprint": "2d0c7b7ab8f8aacf", "layer": "quality", "severity": "medium", "confidence": 1.0, "tags": ["placeholder", "mock-data", "critical-flow", "generated-repo-pattern"]}}, {"ruleId": "scanner-ea8f3013f588db25", "level": "note", "message": {"text": "Shallow git history limits provenance confidence"}, "properties": {"repobilityId": "5a322429a4b80c8c", "scanner": "scanner-primary", "fingerprint": "ea8f3013f588db25", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["provenance", "git-history", "generated-repo-pattern"]}}, {"ruleId": "scanner-8424db9c75e04ba4", "level": "none", "message": {"text": "Very short observed git history"}, "properties": {"repobilityId": "6e353b59652f69f3", "scanner": "scanner-primary", "fingerprint": "8424db9c75e04ba4", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["provenance", "git-history", "generated-repo-pattern"]}}, {"ruleId": "scanner-f13bc51ddeae92a0", "level": "none", "message": {"text": "Commented-code block (6 lines) in tests/test_scan_model_roundtrip.py:35"}, "properties": {"repobilityId": "c66967b043b9b50e", "scanner": "scanner-primary", "fingerprint": "f13bc51ddeae92a0", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-587fe7787afb15bc", "level": "note", "message": {"text": "Legacy-named symbol `test_precomputed_mask_returned_as_copy` in tests/test_measurements_roi_resolve.py:23"}, "properties": {"repobilityId": "d0db16ea46e5b551", "scanner": "scanner-primary", "fingerprint": "587fe7787afb15bc", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "legacy-marker", "dead-code"]}}, {"ruleId": "scanner-0c65a7d960a9a38c", "level": "note", "message": {"text": "Legacy-named symbol `test_no_usable_adjacent_differences_returns_copy` in tests/test_processing.py:649"}, "properties": {"repobilityId": "767994d9499cbeda", "scanner": "scanner-primary", "fingerprint": "0c65a7d960a9a38c", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "legacy-marker", "dead-code"]}}, {"ruleId": "scanner-7db038c587865933", "level": "none", "message": {"text": "Commented-code block (5 lines) in tests/test_processing.py:141"}, "properties": {"repobilityId": "928f27fa6de9e50e", "scanner": "scanner-primary", "fingerprint": "7db038c587865933", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-39f5cd67eee601c5", "level": "none", "message": {"text": "Commented-code block (14 lines) in tests/conftest.py:106"}, "properties": {"repobilityId": "ebb0a51a87511cc9", "scanner": "scanner-primary", "fingerprint": "39f5cd67eee601c5", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-4ed7dbb74188756f", "level": "note", "message": {"text": "Legacy-named symbol `par32_v2` in tests/test_spec_io.py:189"}, "properties": {"repobilityId": "1dde0b74c22cd6c5", "scanner": "scanner-primary", "fingerprint": "4ed7dbb74188756f", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "legacy-marker", "dead-code"]}}, {"ruleId": "scanner-1a8c692cd3ac0a81", "level": "note", "message": {"text": "Legacy-named symbol `test_no_speed_and_no_extras_returns_copy` in tests/test_mains_pickup.py:322"}, "properties": {"repobilityId": "92c3a004b5ee3966", "scanner": "scanner-primary", "fingerprint": "1a8c692cd3ac0a81", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "legacy-marker", "dead-code"]}}, {"ruleId": "scanner-26ce86cda30fcf53", "level": "none", "message": {"text": "Commented-code block (5 lines) in tests/test_measurements_formatting.py:117"}, "properties": {"repobilityId": "0328e5a27686fd4d", "scanner": "scanner-primary", "fingerprint": "26ce86cda30fcf53", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-d90173cf789abecc", "level": "none", "message": {"text": "Commented-code block (6 lines) in tests/test_gui_features.py:232"}, "properties": {"repobilityId": "6a2a71de1ca81e72", "scanner": "scanner-primary", "fingerprint": "d90173cf789abecc", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-6e7949a762d749ed", "level": "none", "message": {"text": "Commented-code block (5 lines) in tests/test_calibration_edge_cases.py:156"}, "properties": {"repobilityId": "a5e8b54b59f43e41", "scanner": "scanner-primary", "fingerprint": "6e7949a762d749ed", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-4f885d91c28ae069", "level": "note", "message": {"text": "Legacy-named symbol `m_old` in tests/test_inverse_fft.py:70"}, "properties": {"repobilityId": "c71e3abd9601cf08", "scanner": "scanner-primary", "fingerprint": "4f885d91c28ae069", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "legacy-marker", "dead-code"]}}, {"ruleId": "scanner-5d5055ae1f3a7579", "level": "note", "message": {"text": "Legacy-named symbol `nOld` in tests/test_sxm_processing_comment.py:100"}, "properties": {"repobilityId": "74a6d6ad62d33328", "scanner": "scanner-primary", "fingerprint": "5d5055ae1f3a7579", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "legacy-marker", "dead-code"]}}, {"ruleId": "scanner-dd47d6291ef32c9d", "level": "note", "message": {"text": "Legacy-named symbol `c_x_old` in tests/test_bragg_calibration.py:313"}, "properties": {"repobilityId": "cc17b80bc5f20535", "scanner": "scanner-primary", "fingerprint": "dd47d6291ef32c9d", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "legacy-marker", "dead-code"]}}, {"ruleId": "scanner-be7cc2f8fa9aca77", "level": "none", "message": {"text": "Commented-code block (6 lines) in tests/test_step_edges.py:233"}, "properties": {"repobilityId": "761fca0148b2f910", "scanner": "scanner-primary", "fingerprint": "be7cc2f8fa9aca77", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-e4ba2f9c08661438", "level": "none", "message": {"text": "Commented-code block (7 lines) in probeflow/processing/bragg.py:257"}, "properties": {"repobilityId": "f127c239cbeaf622", "scanner": "scanner-primary", "fingerprint": "e4ba2f9c08661438", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-55c62876c39ac423", "level": "none", "message": {"text": "Commented-code block (5 lines) in probeflow/processing/mains_pickup.py:356"}, "properties": {"repobilityId": "0d55a268e0e9e72d", "scanner": "scanner-primary", "fingerprint": "55c62876c39ac423", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-49a206d9d1ef6991", "level": "none", "message": {"text": "Commented-code block (5 lines) in probeflow/processing/geometry.py:116"}, "properties": {"repobilityId": "89b3e70086f8c2d1", "scanner": "scanner-primary", "fingerprint": "49a206d9d1ef6991", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-85f22b4b709a4dff", "level": "none", "message": {"text": "Commented-code block (9 lines) in probeflow/processing/background.py:259"}, "properties": {"repobilityId": "0dbe49a74320b4fc", "scanner": "scanner-primary", "fingerprint": "85f22b4b709a4dff", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-d99e0ccac3e8f070", "level": "none", "message": {"text": "Commented-code block (8 lines) in probeflow/processing/filters.py:24"}, "properties": {"repobilityId": "273a3b55a2ade572", "scanner": "scanner-primary", "fingerprint": "d99e0ccac3e8f070", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-e4f56fc29cc9b73c", "level": "none", "message": {"text": "Commented-code block (5 lines) in probeflow/processing/gui_adapter.py:55"}, "properties": {"repobilityId": "abefaa50bc29a412", "scanner": "scanner-primary", "fingerprint": "e4f56fc29cc9b73c", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-9c09f1c27e55d38d", "level": "none", "message": {"text": "Commented-code block (5 lines) in probeflow/processing/bad_lines.py:291"}, "properties": {"repobilityId": "c5d99cbe2ff495fb", "scanner": "scanner-primary", "fingerprint": "9c09f1c27e55d38d", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-a0fb18a16af14f4b", "level": "none", "message": {"text": "Commented-code block (10 lines) in probeflow/processing/state.py:549"}, "properties": {"repobilityId": "282a4c0fea54a753", "scanner": "scanner-primary", "fingerprint": "a0fb18a16af14f4b", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-ebe454da3b4f6018", "level": "none", "message": {"text": "Commented-code block (9 lines) in probeflow/processing/alignment.py:52"}, "properties": {"repobilityId": "03de0ca1a7c6d9ad", "scanner": "scanner-primary", "fingerprint": "ebe454da3b4f6018", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-ff9780972142ff9b", "level": "note", "message": {"text": "Legacy-named symbol `u_old` in probeflow/processing/tv.py:136"}, "properties": {"repobilityId": "639c1df6ff62c013", "scanner": "scanner-primary", "fingerprint": "ff9780972142ff9b", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "legacy-marker", "dead-code"]}}, {"ruleId": "scanner-8a310845871ba5dd", "level": "none", "message": {"text": "Commented-code block (6 lines) in probeflow/processing/tv.py:127"}, "properties": {"repobilityId": "a5e784977fceaa75", "scanner": "scanner-primary", "fingerprint": "8a310845871ba5dd", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-927afb50862db133", "level": "none", "message": {"text": "Commented-code block (8 lines) in probeflow/processing/edge_detection.py:168"}, "properties": {"repobilityId": "f41184187a573599", "scanner": "scanner-primary", "fingerprint": "927afb50862db133", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-351b40229dd47e1c", "level": "none", "message": {"text": "Commented-code block (5 lines) in probeflow/gui/app.py:121"}, "properties": {"repobilityId": "f014c9c96766a5fe", "scanner": "scanner-primary", "fingerprint": "351b40229dd47e1c", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-b45a66e43bdd382b", "level": "warning", "message": {"text": "Network/subprocess call without timeout or try/except \u2014 probeflow/gui/app.py:1666"}, "properties": {"repobilityId": "c525392307aa7e5d", "scanner": "scanner-primary", "fingerprint": "b45a66e43bdd382b", "layer": "quality", "severity": "medium", "confidence": 1.0, "tags": ["integrity", "fragile-runtime", "robustness"]}}, {"ruleId": "scanner-f79d28f7d14bf8df", "level": "none", "message": {"text": "Commented-code block (6 lines) in probeflow/gui/workers.py:315"}, "properties": {"repobilityId": "ac693cecc3f5f612", "scanner": "scanner-primary", "fingerprint": "f79d28f7d14bf8df", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-59a6616d3c72b5b5", "level": "none", "message": {"text": "Commented-code block (5 lines) in probeflow/gui/roi_items.py:142"}, "properties": {"repobilityId": "1781b5211ca6a662", "scanner": "scanner-primary", "fingerprint": "59a6616d3c72b5b5", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-eff63f6edff3ba8c", "level": "none", "message": {"text": "Commented-code block (6 lines) in probeflow/gui/image_canvas.py:234"}, "properties": {"repobilityId": "d04ea697973d5b68", "scanner": "scanner-primary", "fingerprint": "eff63f6edff3ba8c", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-4632bf1898d9bb6b", "level": "note", "message": {"text": "Legacy-named symbol `lattice_structures_v1` in probeflow/gui/lattice_correction_ui.py:11"}, "properties": {"repobilityId": "84a5bcb485f330a2", "scanner": "scanner-primary", "fingerprint": "4632bf1898d9bb6b", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "legacy-marker", "dead-code"]}}, {"ruleId": "scanner-1f1547c56fec6c53", "level": "none", "message": {"text": "Commented-code block (5 lines) in probeflow/gui/browse/thumbnail_grid.py:31"}, "properties": {"repobilityId": "2e0236f4d05999b0", "scanner": "scanner-primary", "fingerprint": "1f1547c56fec6c53", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-bb530c4db16d0e8a", "level": "none", "message": {"text": "Commented-code block (5 lines) in probeflow/gui/lattice_grid/fft_overlay.py:192"}, "properties": {"repobilityId": "73a763dcf4eabb94", "scanner": "scanner-primary", "fingerprint": "bb530c4db16d0e8a", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-f8c37f697dfe63d0", "level": "note", "message": {"text": "Legacy-named symbol `_on_canvas_roi_copy` in probeflow/gui/viewer/image_viewer_roi_mixin.py:333"}, "properties": {"repobilityId": "e9679bd8c95d9f8e", "scanner": "scanner-primary", "fingerprint": "f8c37f697dfe63d0", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "legacy-marker", "dead-code"]}}, {"ruleId": "scanner-979e81f530aab184", "level": "none", "message": {"text": "Commented-code block (5 lines) in probeflow/gui/viewer/window_menu.py:73"}, "properties": {"repobilityId": "13cb78db16a4caa4", "scanner": "scanner-primary", "fingerprint": "979e81f530aab184", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-278040cdee78e009", "level": "none", "message": {"text": "Commented-code block (5 lines) in probeflow/gui/viewer/image_viewer_display_mixin.py:309"}, "properties": {"repobilityId": "94f9c2339e810fd0", "scanner": "scanner-primary", "fingerprint": "278040cdee78e009", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-76da0494b2b07683", "level": "note", "message": {"text": "Legacy-named symbol `act_copy` in probeflow/gui/viewer/context_menus.py:85"}, "properties": {"repobilityId": "b2235cdba56c7bfe", "scanner": "scanner-primary", "fingerprint": "76da0494b2b07683", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "legacy-marker", "dead-code"]}}, {"ruleId": "scanner-2a6e0fe7e6d82db3", "level": "none", "message": {"text": "Commented-code block (5 lines) in probeflow/gui/viewer/image_viewer_processing_export_mixin.py:523"}, "properties": {"repobilityId": "251b14a14d1daa05", "scanner": "scanner-primary", "fingerprint": "2a6e0fe7e6d82db3", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-284203b6e068e46c", "level": "none", "message": {"text": "Commented-code block (5 lines) in probeflow/gui/viewer/image_viewer_tools_mixin.py:199"}, "properties": {"repobilityId": "e9b92e101441d05c", "scanner": "scanner-primary", "fingerprint": "284203b6e068e46c", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-6b889d52710c20d5", "level": "none", "message": {"text": "Commented-code block (5 lines) in probeflow/gui/widgets/image_measurements_panel.py:68"}, "properties": {"repobilityId": "607e98200a298f58", "scanner": "scanner-primary", "fingerprint": "6b889d52710c20d5", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-f27aea6aab46f57f", "level": "warning", "message": {"text": "Network/subprocess call without timeout or try/except \u2014 probeflow/gui/terminal/__init__.py:339"}, "properties": {"repobilityId": "f3e3bf1e0ecc1aca", "scanner": "scanner-primary", "fingerprint": "f27aea6aab46f57f", "layer": "quality", "severity": "medium", "confidence": 1.0, "tags": ["integrity", "fragile-runtime", "robustness"]}}, {"ruleId": "scanner-869b7553282835b7", "level": "none", "message": {"text": "Commented-code block (9 lines) in probeflow/gui/features/__init__.py:407"}, "properties": {"repobilityId": "4e9ec32515b2809d", "scanner": "scanner-primary", "fingerprint": "869b7553282835b7", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-dfde459aea7769f1", "level": "none", "message": {"text": "Commented-code block (6 lines) in probeflow/gui/features/controller.py:259"}, "properties": {"repobilityId": "77cf5ad5972692ec", "scanner": "scanner-primary", "fingerprint": "dfde459aea7769f1", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-cf45fcb2a221d003", "level": "none", "message": {"text": "Commented-code block (6 lines) in probeflow/gui/features/window.py:77"}, "properties": {"repobilityId": "71ce14fdf596f94c", "scanner": "scanner-primary", "fingerprint": "cf45fcb2a221d003", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-379b09cbdda41100", "level": "none", "message": {"text": "Commented-code block (6 lines) in probeflow/gui/dialogs/image_viewer.py:156"}, "properties": {"repobilityId": "eb17fc266a9b21b4", "scanner": "scanner-primary", "fingerprint": "379b09cbdda41100", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-63591a4ab3119df3", "level": "none", "message": {"text": "Commented-code block (6 lines) in probeflow/gui/dialogs/fft_viewer.py:783"}, "properties": {"repobilityId": "66124dafff67c58d", "scanner": "scanner-primary", "fingerprint": "63591a4ab3119df3", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-9e0f1f58b9f73ff9", "level": "none", "message": {"text": "Commented-code block (7 lines) in probeflow/gui/dialogs/fft_viewer_lattice_mixin.py:283"}, "properties": {"repobilityId": "b7f14cd7d9735736", "scanner": "scanner-primary", "fingerprint": "9e0f1f58b9f73ff9", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-4a2f76acedb8379e", "level": "note", "message": {"text": "Legacy-named symbol `_on_canvas_roi_copy` in probeflow/gui/dialogs/image_viewer_build_mixin.py:774"}, "properties": {"repobilityId": "58fa595aae12d489", "scanner": "scanner-primary", "fingerprint": "4a2f76acedb8379e", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "legacy-marker", "dead-code"]}}, {"ruleId": "scanner-0cd3a64a0db5da47", "level": "none", "message": {"text": "Commented-code block (5 lines) in probeflow/gui/dialogs/fft_viewer_mains_mixin.py:183"}, "properties": {"repobilityId": "258feedf9b56e406", "scanner": "scanner-primary", "fingerprint": "0cd3a64a0db5da47", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-ca8a5e918025ca12", "level": "none", "message": {"text": "Commented-code block (6 lines) in probeflow/cli/commands/processing.py:77"}, "properties": {"repobilityId": "b8f8ac5a3553eba0", "scanner": "scanner-primary", "fingerprint": "ca8a5e918025ca12", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-2c0a777105925496", "level": "none", "message": {"text": "Commented-code block (7 lines) in probeflow/analysis/lattice.py:457"}, "properties": {"repobilityId": "1290413598402cef", "scanner": "scanner-primary", "fingerprint": "2c0a777105925496", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-dcc543520a304088", "level": "none", "message": {"text": "Commented-code block (8 lines) in probeflow/analysis/line_periodicity.py:197"}, "properties": {"repobilityId": "44381afe9a939ee4", "scanner": "scanner-primary", "fingerprint": "dcc543520a304088", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-5a80ce4b926be806", "level": "none", "message": {"text": "Commented-code block (6 lines) in probeflow/analysis/roi_statistics.py:57"}, "properties": {"repobilityId": "e3fbe42fda494714", "scanner": "scanner-primary", "fingerprint": "5a80ce4b926be806", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-5707de3e853cfe67", "level": "none", "message": {"text": "Commented-code block (6 lines) in probeflow/analysis/features.py:568"}, "properties": {"repobilityId": "d46fc51381608df0", "scanner": "scanner-primary", "fingerprint": "5707de3e853cfe67", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-a920d42f5c5866ca", "level": "none", "message": {"text": "Commented-code block (6 lines) in probeflow/analysis/grains.py:54"}, "properties": {"repobilityId": "c8b04f8befd1c136", "scanner": "scanner-primary", "fingerprint": "a920d42f5c5866ca", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-eb868c751704f5bf", "level": "none", "message": {"text": "Commented-code block (8 lines) in probeflow/analysis/spec_plot.py:314"}, "properties": {"repobilityId": "0cc383ce329f65b1", "scanner": "scanner-primary", "fingerprint": "eb868c751704f5bf", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-b41e40651a0d9125", "level": "none", "message": {"text": "Commented-code block (8 lines) in probeflow/analysis/feature_finder.py:17"}, "properties": {"repobilityId": "7038d55045fa5970", "scanner": "scanner-primary", "fingerprint": "b41e40651a0d9125", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-67817803d4220568", "level": "none", "message": {"text": "Commented-code block (5 lines) in probeflow/io/mask_sidecar.py:94"}, "properties": {"repobilityId": "e72e7f6230856fd7", "scanner": "scanner-primary", "fingerprint": "67817803d4220568", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-58b66b9ca89c2b8b", "level": "note", "message": {"text": "Legacy-named symbol `stem_legacy` in probeflow/io/roi_sidecar.py:41"}, "properties": {"repobilityId": "418658142801ac05", "scanner": "scanner-primary", "fingerprint": "58b66b9ca89c2b8b", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "legacy-marker", "dead-code"]}}, {"ruleId": "scanner-6679c4812243cb23", "level": "none", "message": {"text": "Commented-code block (7 lines) in probeflow/io/roi_sidecar.py:103"}, "properties": {"repobilityId": "9ccb958cd7176601", "scanner": "scanner-primary", "fingerprint": "6679c4812243cb23", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-0d5d17106b6de7ee", "level": "none", "message": {"text": "Commented-code block (5 lines) in probeflow/io/converters/createc_dat_to_sxm.py:240"}, "properties": {"repobilityId": "0363dcd023793bcd", "scanner": "scanner-primary", "fingerprint": "0d5d17106b6de7ee", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-1adf07eb4b5d9db4", "level": "none", "message": {"text": "Commented-code block (8 lines) in probeflow/io/readers/createc_dat.py:40"}, "properties": {"repobilityId": "b2d3996198bb2765", "scanner": "scanner-primary", "fingerprint": "1adf07eb4b5d9db4", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-fd2917a4deb74f3c", "level": "none", "message": {"text": "Commented-code block (5 lines) in probeflow/core/metadata.py:270"}, "properties": {"repobilityId": "9b676a854eef5c82", "scanner": "scanner-primary", "fingerprint": "fd2917a4deb74f3c", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-7b7a3d151aa80048", "level": "none", "message": {"text": "Commented-code block (5 lines) in probeflow/core/file_type.py:100"}, "properties": {"repobilityId": "40389c4cf5b64192", "scanner": "scanner-primary", "fingerprint": "7b7a3d151aa80048", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-3a992a3df8c1f528", "level": "none", "message": {"text": "Commented-code block (6 lines) in probeflow/core/indexing.py:451"}, "properties": {"repobilityId": "624c29f0021e755f", "scanner": "scanner-primary", "fingerprint": "3a992a3df8c1f528", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-83a251de417440fc", "level": "none", "message": {"text": "Commented-code block (11 lines) in probeflow/core/scan_model.py:199"}, "properties": {"repobilityId": "abf99f55d2437968", "scanner": "scanner-primary", "fingerprint": "83a251de417440fc", "layer": "quality", "severity": "info", "confidence": 1.0, "tags": ["integrity", "commented-code", "dead-code"]}}, {"ruleId": "scanner-2c04133e54348533", "level": "note", "message": {"text": "Near-duplicate function bodies in 2 places"}, "properties": {"repobilityId": "4adbc32760ac8587", "scanner": "scanner-primary", "fingerprint": "2c04133e54348533", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}, {"ruleId": "scanner-2c04133e54348533", "level": "note", "message": {"text": "Near-duplicate function bodies in 2 places"}, "properties": {"repobilityId": "52fc4fbf29ef41a8", "scanner": "scanner-primary", "fingerprint": "2c04133e54348533", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}, {"ruleId": "scanner-2c04133e54348533", "level": "note", "message": {"text": "Near-duplicate function bodies in 2 places"}, "properties": {"repobilityId": "fa4e9a2394387e1e", "scanner": "scanner-primary", "fingerprint": "2c04133e54348533", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}, {"ruleId": "scanner-2c04133e54348533", "level": "note", "message": {"text": "Near-duplicate function bodies in 2 places"}, "properties": {"repobilityId": "d085e279b9a38972", "scanner": "scanner-primary", "fingerprint": "2c04133e54348533", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}, {"ruleId": "scanner-2c04133e54348533", "level": "note", "message": {"text": "Near-duplicate function bodies in 2 places"}, "properties": {"repobilityId": "c311f40c9a44f162", "scanner": "scanner-primary", "fingerprint": "2c04133e54348533", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}, {"ruleId": "scanner-76a2f6818267a9a8", "level": "note", "message": {"text": "Near-duplicate function bodies in 8 places"}, "properties": {"repobilityId": "6f6b3cd682490b8f", "scanner": "scanner-primary", "fingerprint": "76a2f6818267a9a8", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}, {"ruleId": "scanner-2c04133e54348533", "level": "note", "message": {"text": "Near-duplicate function bodies in 2 places"}, "properties": {"repobilityId": "63e15b5b26b01042", "scanner": "scanner-primary", "fingerprint": "2c04133e54348533", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}, {"ruleId": "scanner-2c04133e54348533", "level": "note", "message": {"text": "Near-duplicate function bodies in 2 places"}, "properties": {"repobilityId": "8fe5d9fc4ab1a076", "scanner": "scanner-primary", "fingerprint": "2c04133e54348533", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}, {"ruleId": "scanner-be46ea126aa5d8dc", "level": "note", "message": {"text": "Near-duplicate function bodies in 3 places"}, "properties": {"repobilityId": "7f46dcce84393b33", "scanner": "scanner-primary", "fingerprint": "be46ea126aa5d8dc", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}, {"ruleId": "scanner-2c04133e54348533", "level": "note", "message": {"text": "Near-duplicate function bodies in 2 places"}, "properties": {"repobilityId": "97defd98cfeaf8c7", "scanner": "scanner-primary", "fingerprint": "2c04133e54348533", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}, {"ruleId": "scanner-2c04133e54348533", "level": "note", "message": {"text": "Near-duplicate function bodies in 2 places"}, "properties": {"repobilityId": "9c08aa9cf444c957", "scanner": "scanner-primary", "fingerprint": "2c04133e54348533", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}, {"ruleId": "scanner-2c04133e54348533", "level": "note", "message": {"text": "Near-duplicate function bodies in 2 places"}, "properties": {"repobilityId": "58a02a692dab5bc0", "scanner": "scanner-primary", "fingerprint": "2c04133e54348533", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}, {"ruleId": "scanner-2c04133e54348533", "level": "note", "message": {"text": "Near-duplicate function bodies in 2 places"}, "properties": {"repobilityId": "e9f03825109de19e", "scanner": "scanner-primary", "fingerprint": "2c04133e54348533", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}, {"ruleId": "scanner-2c04133e54348533", "level": "note", "message": {"text": "Near-duplicate function bodies in 2 places"}, "properties": {"repobilityId": "b6c79eccbe10579f", "scanner": "scanner-primary", "fingerprint": "2c04133e54348533", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}, {"ruleId": "scanner-2c04133e54348533", "level": "note", "message": {"text": "Near-duplicate function bodies in 2 places"}, "properties": {"repobilityId": "e7c2122e94c30134", "scanner": "scanner-primary", "fingerprint": "2c04133e54348533", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}, {"ruleId": "scanner-2c04133e54348533", "level": "note", "message": {"text": "Near-duplicate function bodies in 2 places"}, "properties": {"repobilityId": "41c11de64504feed", "scanner": "scanner-primary", "fingerprint": "2c04133e54348533", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}, {"ruleId": "scanner-2c04133e54348533", "level": "note", "message": {"text": "Near-duplicate function bodies in 2 places"}, "properties": {"repobilityId": "542fa76b0b47dfaa", "scanner": "scanner-primary", "fingerprint": "2c04133e54348533", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}, {"ruleId": "scanner-2c04133e54348533", "level": "note", "message": {"text": "Near-duplicate function bodies in 2 places"}, "properties": {"repobilityId": "a7663421a912e1d4", "scanner": "scanner-primary", "fingerprint": "2c04133e54348533", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}, {"ruleId": "scanner-2c04133e54348533", "level": "note", "message": {"text": "Near-duplicate function bodies in 2 places"}, "properties": {"repobilityId": "98ee8ccef16fb199", "scanner": "scanner-primary", "fingerprint": "2c04133e54348533", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}, {"ruleId": "scanner-2c04133e54348533", "level": "note", "message": {"text": "Near-duplicate function bodies in 2 places"}, "properties": {"repobilityId": "cf89db8cacb90d74", "scanner": "scanner-primary", "fingerprint": "2c04133e54348533", "layer": "quality", "severity": "low", "confidence": 1.0, "tags": ["integrity", "duplicate", "dry"]}}]}]}