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Issue title

hono: GHSA-88fw-hqm2-52qc

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Severity Rule Title File:line
HIGH MINED001 [MINED001] Bare Except Pass: except: pass or except Exception: pass — silently swallows e… query/index_server.py:99
HIGH SEC135 [SEC135] Auth/permission check missing on AI-generated endpoint: Mutating HTTP endpoint g… query/index_server.py:208
HIGH COMP001 [COMP001] High cognitive complexity: Function `passes_filters` has cognitive complexity 2… query/index_server.py:142
HIGH GHSA-j3q9-mxjg-w52f path-to-regexp: GHSA-j3q9-mxjg-w52f package-lock.json
HIGH GHSA-88fw-hqm2-52qc hono: GHSA-88fw-hqm2-52qc package-lock.json
HIGH GHSA-v39h-62p7-jpjc fast-uri: GHSA-v39h-62p7-jpjc package-lock.json
HIGH GHSA-q3j6-qgpj-74h6 fast-uri: GHSA-q3j6-qgpj-74h6 package-lock.json
HIGH MINED112 FastAPI POST /search has no auth query/index_server.py:209
MED CFG006 [CFG006] Missing .gitignore: No .gitignore file. Risk of committing secrets and build art… —
MED SEC136 [SEC136] AI-typical over-broad exception handler swallowing all errors: Catch-all excepti… query/index_server.py:136
MED COMP001 [COMP001] High cognitive complexity: Function `search` has cognitive complexity 22 (Sonar… query/index_server.py:209
MED DEPCUR-NPM npm package `googleapis` is 23 major version(s) behind (150.0.1 -> 173.0.0) package.json
MED GHSA-q8mj-m7cp-5q26 qs: GHSA-q8mj-m7cp-5q26 package-lock.json
MED GHSA-27v5-c462-wpq7 path-to-regexp: GHSA-27v5-c462-wpq7 package-lock.json
MED GHSA-v2v4-37r5-5v8g ip-address: GHSA-v2v4-37r5-5v8g package-lock.json
MED GHSA-xrhx-7g5j-rcj5 hono: GHSA-xrhx-7g5j-rcj5 package-lock.json
MED GHSA-xpcf-pg52-r92g hono: GHSA-xpcf-pg52-r92g package-lock.json
MED GHSA-xf4j-xp2r-rqqx hono: GHSA-xf4j-xp2r-rqqx package-lock.json
MED GHSA-wwfh-h76j-fc44 hono: GHSA-wwfh-h76j-fc44 package-lock.json
MED GHSA-wmmm-f939-6g9c hono: GHSA-wmmm-f939-6g9c package-lock.json
MED GHSA-wgpf-jwqj-8h8p hono: GHSA-wgpf-jwqj-8h8p package-lock.json
MED GHSA-rv63-4mwf-qqc2 hono: GHSA-rv63-4mwf-qqc2 package-lock.json
MED GHSA-r5rp-j6wh-rvv4 hono: GHSA-r5rp-j6wh-rvv4 package-lock.json
MED GHSA-qp7p-654g-cw7p hono: GHSA-qp7p-654g-cw7p package-lock.json
MED GHSA-p77w-8qqv-26rm hono: GHSA-p77w-8qqv-26rm package-lock.json
MED GHSA-j6c9-x7qj-28xf hono: GHSA-j6c9-x7qj-28xf package-lock.json
MED GHSA-f577-qrjj-4474 hono: GHSA-f577-qrjj-4474 package-lock.json
MED GHSA-9vqf-7f2p-gf9v hono: GHSA-9vqf-7f2p-gf9v package-lock.json
MED GHSA-69xw-7hcm-h432 hono: GHSA-69xw-7hcm-h432 package-lock.json
MED GHSA-458j-xx4x-4375 hono: GHSA-458j-xx4x-4375 package-lock.json
MED GHSA-3hrh-pfw6-9m5x hono: GHSA-3hrh-pfw6-9m5x package-lock.json
MED GHSA-2gcr-mfcq-wcc3 hono: GHSA-2gcr-mfcq-wcc3 package-lock.json
MED GHSA-26pp-8wgv-hjvm hono: GHSA-26pp-8wgv-hjvm package-lock.json
MED GHSA-f886-m6hf-6m8v brace-expansion: GHSA-f886-m6hf-6m8v package-lock.json
MED GHSA-92pp-h63x-v22m @hono/node-server: GHSA-92pp-h63x-v22m package-lock.json
LOW COMP001 [COMP001] High cognitive complexity: Function `get_doc` has cognitive complexity 10 (Sona… query/index_server.py:254
LOW DEPCUR-NPM npm package `@modelcontextprotocol/sdk` is minor version(s) behind (1.27.1 -> 1.29.0) package.json
LOW GHSA-hm8q-7f3q-5f36 hono: GHSA-hm8q-7f3q-5f36 package-lock.json
LOW CORE_NO_LICENSE No LICENSE file —
INFO MINED050 [MINED050] Stub Only Function: Function declared but body is just pass, return None, rais… query/index_server.py:100
Reset to top 5 40 findings available (after auto-suppression of test files + won't-fix)

Issue body (markdown)

## Code-quality scan: `noelrim/midnight-mcp`

**Score: 69/100 (B-)**  ·  40 findings  ·  scanned 2026-06-19 19:49 UTC  ·  358 LOC

| Severity | Count |
|---|---|
| CRITICAL | 0 |
| HIGH | 8 |
| MEDIUM | 27 |
| LOW | 4 |

📊 [Full filterable report](https://repobility.com/scan/69d2a968-a339-4169-84c9-27aaee063419/)  ·  ![scorecard](https://repobility.com/scan/69d2a968-a339-4169-84c9-27aaee063419/report.png?v=1781898576-s2)

### Top findings

1. **HIGH** `MINED001` — Bare Except Pass
   `query/index_server.py:99` · CWE-755 · ✓ Repobility
2. **HIGH** `SEC135` — Auth/permission check missing on AI-generated endpoint
   `query/index_server.py:208` · CWE-862
3. **HIGH** `COMP001` — High cognitive complexity: Function `passes_filters` has cognitive complexity 29 (SonarSou
   `query/index_server.py:142`
4. **HIGH** `GHSA-j3q9-mxjg-w52f` — path-to-regexp: GHSA-j3q9-mxjg-w52f
   `package-lock.json`
5. **HIGH** `GHSA-88fw-hqm2-52qc` — hono: GHSA-88fw-hqm2-52qc
   `package-lock.json`

---

**Security note**: this issue is public. If any flagged finding is a real, exploitable vulnerability, please redirect to your `SECURITY.md` policy or open a [private security advisory](https://docs.github.com/en/code-security/security-advisories/guidance-on-reporting-and-writing-information-about-vulnerabilities/privately-reporting-a-security-vulnerability) instead. We're happy to close this and re-submit privately.

---

_Filed automatically. Close this issue if not useful — we won't refile. Full report: https://repobility.com/scan/69d2a968-a339-4169-84c9-27aaee063419/_
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