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DASDAE/dascore

https://github.com/DASDAE/dascore · scanned 2026-06-05 17:59 UTC (4 days, 19 hours ago) · 10 languages

284 raw signals (130 security + 154 graph) 85th percentile · Python · medium (20-100K LoC)

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UNIFIED Repobility · multi-layer engine · AI coders

Complete repo analysis

Last scanned 4 days, 19 hours ago · v2 · 100 actionable findings from 2 signal sources. 90 repeated signals grouped for readability. Security checks, system graph analysis, and verified AI-agent feedback are merged into one review queue.

JSON
Combined
81.5
/100
Security checks
79
50 findings
System graph
84
88.9% cov · 50 findings
Critical
2
click to filter
Agents
6
0 votes
Crowd
0
reported
Score breakdown â 2026-05-18-v5
Component Sub-score Weight Contribution
structure_score 60.0 0.15 9.00
security_score 95.8 0.25 23.95
testing_score 100.0 0.20 20.00
documentation_score 69.0 0.15 10.35
practices_score 85.0 0.15 12.75
code_quality 58.0 0.10 5.80
Overall 1.00 81.8
Severity distribution — click a segment to filter
Active filters: excluding tests × Reset all
Severity: Critical 2 High 5 Medium 4 Low 47 9-Layer: Software Security Quality Integrity Frontend Hardware Data Network Cicd Source: Security checks 50 System graph 50 Crowd 0 Layer: Cicd 8 Security 1 Quality 71 Software 15 Api 1 Hardware 3 Frontend 1
Scan summary Quality grade A- (82/100). Dimensions: security 96, maintainability 60. 130 findings (32 security). 57,367 lines analyzed.

Showing 57 of 100 actionable findings. 190 raw detector signals were grouped into reader-sized issues. Click TP / FP to vote on a finding's accuracy — votes adjust the confidence weighting and improve detection across the platform.

critical Security checks quality Quality conf 1.00 ✓ Repobility [MINED030] Python Pickle Loads: pickle.loads() can execute arbitrary code via __reduce__.
Review and fix per the pattern semantics. See CWE-502 / for context.
dascore/io/pickle/core.py:43
critical Security checks quality Quality conf 1.00 [SEC081] Python: pickle.loads / marshal.loads on untrusted data: pickle.load(s) and marshal.load(s) execute arbitrary code on untrusted input. Ported from dlint DUO103 / DUO120 (BSD-3).
Use json, msgpack, or protobuf for untrusted data. If pickle is required, sign the payload with HMAC.
dascore/io/pickle/core.py:43
high Security checks quality Quality conf 1.00 ✓ Repobility Missing import: `array` used but not imported
The file uses `array.something(...)` but never imports `array`. This raises NameError at runtime the first time the line executes.
dascore/examples.py:95
high Security checks quality Quality conf 1.00 ✓ Repobility 8 occurrences `self.parse_sections` used but never assigned in __init__
Method `__call__` of class `NumpyDocStrParser` reads `self.parse_sections`, but no assignment to it exists in __init__ (and no class-level fallback). This raises AttributeError the first time the method runs against an instance.
lines 292, 293, 417, 486, 490, 503, 505, 510
scripts/_render_api.py:292, 293, 417, 486, 490, 503, 505, 510 (8 hits)
high Security checks software dependencies conf 0.90 ✓ Repobility Dockerfile FROM `ubuntu:22.04` not pinned by digest
`FROM ubuntu:22.04` resolves the tag at build time. The registry CAN re-push a different image for the same tag, so every build is potentially different. Production images should pin to `image@sha256:...` for reproducibility + supply-chain integrity.
Dockerfile:2
low Security checks cicd CI/CD security conf 0.90 ✓ Repobility 17 occurrences GitHub Action is tag-pinned rather than SHA-pinned
Action `actions/checkout` pinned to mutable ref `@v4` uses a mutable tag or branch. Pin external actions to a reviewed full commit SHA when the workflow is security-sensitive.
9 files, 17 locations
.github/workflows/build_deploy_stable_docs.yaml:29, 49, 73 (5 hits)
.github/workflows/lint.yml:17, 26 (2 hits)
.github/workflows/run_min_dep_tests.yml:36, 54 (2 hits)
.github/workflows/runtests.yml:38, 60 (2 hits)
.github/workflows/test_doc_build.yml:18, 34 (2 hits)
.github/workflows/build_deploy_master_docs.yaml:34
.github/workflows/get_coverage.yml:13
.github/workflows/profile.yml:30
CI/CD securitySupply chainGitHub Actions
medium Security checks cicd CI/CD security conf 0.90 ✓ Repobility 16 occurrences GitHub Action is tag-pinned rather than SHA-pinned
Action `softprops/action-gh-release` pinned to mutable ref `@v2` uses a mutable tag or branch. Pin external actions to a reviewed full commit SHA when the workflow is security-sensitive.
7 files, 16 locations
.github/workflows/test_doc_build.yml:67, 77 (4 hits)
.github/workflows/upload_pypi.yml:20, 36 (4 hits)
.github/workflows/build_deploy_stable_docs.yaml:58 (2 hits)
.github/workflows/lint.yml:25 (2 hits)
.github/workflows/profile.yml:46 (2 hits)
.github/workflows/get_coverage.yml:31
.github/workflows/runtests.yml:82
CI/CD securitySupply chainGitHub Actions
high Security checks software dependencies conf 0.90 ✓ Repobility 5 occurrences pre-commit hook `https://github.com/pre-commit/pre-commit-hooks` pinned to mutable rev `v2.3.0`
`.pre-commit-config.yaml` references `https://github.com/pre-commit/pre-commit-hooks` at `rev: v2.3.0`. If `{rev}` is a branch or version tag, the repo owner can push new code there and `pre-commit install --install-hooks` will fetch it on every developer's machine.
lines 3, 24, 30, 36, 43
.pre-commit-config.yaml:3, 24, 30, 36, 43 (5 hits)
low Security checks security Deserialization conf 1.00 [SEC007] Unsafe Deserialization: Unsafe deserialization can execute arbitrary code.
Use yaml.safe_load() instead of yaml.load(). Avoid pickle for untrusted data.
dascore/io/pickle/core.py:43
low Security checks quality Error handling conf 0.55 ✓ Repobility 4 occurrences Broad exception handler needs review
This handler catches Exception/BaseException. It is actionable when it swallows errors without logging, re-raising, or returning a structured error. Handlers that intentionally convert exceptions into typed error results should not be treated as high risk.
3 files, 4 locations
dascore/io/core.py:363, 413 (2 hits)
dascore/io/tdms/core.py:36
tests/conftest.py:542
Error handlingquality
medium Security checks cicd CI/CD security conf 0.90 Docker build context has no .dockerignore
Without .dockerignore, build context can include source history, local env files, dependencies, and generated artifacts.
.dockerignore CI/CD securitycontainers
high Security checks cicd CI/CD security conf 0.82 Docker final stage has no non-root USER
Docker images run as root unless the image or Dockerfile switches to a non-root user.
Dockerfile:3 CI/CD securitycontainers
medium System graph hardware Security conf 1.00 Dockerfile runs as root: Dockerfile
No non-root USER set. Containers running as root expand the blast radius of any vulnerability inside the image.
Container
medium System graph cicd CI/CD security conf 1.00 3 occurrences GitHub Actions workflow grants broad write permissions
CI tokens with write permissions increase blast radius when an action, dependency, or PR workflow is compromised. Prefer job-level least-privilege permissions.
3 files, 3 locations
.github/workflows/build_deploy_master_docs.yaml
.github/workflows/build_deploy_stable_docs.yaml
.github/workflows/profile.yml
CI/CD securitySupply chainGithub actions
low Security checks cicd CI/CD security conf 0.72 Dockerfile installs recommended OS packages
Installing recommended packages often pulls in unnecessary runtime surface area.
Dockerfile:4 CI/CD securitycontainers
low Security checks cicd CI/CD security conf 0.74 Dockerfile leaves apt package indexes in the image layer
Package indexes increase image size and can expose stale metadata in the final image layer.
Dockerfile:4 CI/CD securitycontainers
low Security checks quality Documentation No LICENSE file
Add a LICENSE file to your repository. Use choosealicense.com to pick the right license (MIT for permissive, Apache 2.0 for patent protection, GPL for copyleft).
low System graph quality Maintenance conf 1.00 31 TODO/FIXME markers
High count of TODO/FIXME/HACK markers — track them as issues so they're not forgotten.
low System graph hardware Coverage conf 1.00 Containers defined but no K8s/orchestration manifest found
Repo has Dockerfiles/compose but no Kubernetes/Nomad manifests. If the target deployment is K8s, the manifests may live in a separate ops repo.
Deployment
low System graph hardware Supply chain conf 1.00 Docker base image is tag-pinned but not digest-pinned: ubuntu:22.04
Container tags can be retagged upstream. Pin production base images to a reviewed digest (`image@sha256:...`) when reproducibility and supply-chain integrity matter.
Dockerfile:2 containersPinned dependencies
low System graph software Dead code candidate conf 1.00 File has no detected symbols: dascore/version.py
Source file with no class/function declarations — possible config, dead code, or scratch file.
low System graph software Dead code candidate conf 1.00 File has no detected symbols: scripts/build_api_docs.py
Source file with no class/function declarations — possible config, dead code, or scratch file.
low System graph software Dead code candidate conf 1.00 File has no detected symbols: scripts/paper/make_viz_figure.py
Source file with no class/function declarations — possible config, dead code, or scratch file.
low System graph software Dead code candidate conf 1.00 File has no detected symbols: tests/test_utils/test_accessor.py
Source file with no class/function declarations — possible config, dead code, or scratch file.
low System graph quality Integrity conf 1.00 Near-duplicate function bodies in 10 places
Functions with the same first-5-line body hash: dascore/io/ap_sensing/core.py:read, dascore/io/optodas/core.py:read, dascore/io/silixah5/core.py:read, dascore/io/dasvader/core.py:read This is *the* AI-coder failure mode (4× more duplication in vibe-coded repos — see https://jw.hn/ai-code-hygiene).…
duplicatesduplication
low System graph quality Integrity conf 1.00 15 occurrences Near-duplicate function bodies in 2 places
Functions with the same first-5-line body hash: dascore/compat.py:is_array_like, dascore/compat.py:is_array This is *the* AI-coder failure mode (4× more duplication in vibe-coded repos — see https://jw.hn/ai-code-hygiene). Consolidate or document why they're separate.
15 occurrences
repo-level (15 hits)
duplicatesduplication
low System graph quality Integrity conf 1.00 Near-duplicate function bodies in 3 places
Functions with the same first-5-line body hash: dascore/io/gdr/core.py:read, dascore/io/neubrex/core.py:read, dascore/io/neubrex/core.py:read This is *the* AI-coder failure mode (4× more duplication in vibe-coded repos — see https://jw.hn/ai-code-hygiene). Consolidate or document why they're separ…
duplicatesduplication
low System graph quality Integrity conf 1.00 3 occurrences Near-duplicate function bodies in 5 places
Functions with the same first-5-line body hash: dascore/utils/moving.py:move_median, dascore/utils/moving.py:move_mean, dascore/utils/moving.py:move_sum, dascore/utils/moving.py:move_min This is *the* AI-coder failure mode (4× more duplication in vibe-coded repos — see https://jw.hn/ai-code-hygien…
3 occurrences
repo-level (3 hits)
duplicatesduplication
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `coord_old` in tests/test_proc/test_aggregate.py:44
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `data_old` in tests/test_proc/test_taper.py:122
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `length_old` in tests/test_proc/test_basic.py:499
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `norm_v1` in dascore/proc/mute.py:196
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `opta_sense_quantx_v2` in tests/test_io/test_common_io.py:73
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `opta_sense_quantx_v2` in tests/test_io/test_prodml/test_prod_ml.py:21
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `patch_old` in tests/test_core/test_patch_chunk.py:427
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `path_old` in scripts/modify_h5_file.py:49
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `test_assign_coords_deprecated` in tests/test_core/test_patch.py:807
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `test_deprecated` in tests/test_transform/test_transformations.py:8
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `test_deprecated` in tests/test_utils/test_patch_utils.py:218
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `test_gauge_multiple_deprecated` in tests/test_transform/test_strain.py:76
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `test_iresample_deprecated` in tests/test_proc/test_resample.py:276
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `test_iselect_deprecated` in tests/test_proc/test_proc_coords.py:318
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `test_lag_deprecated` in tests/test_proc/test_correlate.py:185
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `test_notch_deprecated` in tests/test_proc/test_filter.py:436
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `TestDeprecated` in tests/test_utils/test_deprecated.py:10
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph software Dead code conf 1.00 Possibly dead Python function: downsize_raw_data
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
scripts/modify_h5_file.py:72
low System graph software Dead code conf 1.00 Possibly dead Python function: patch_array_function
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
dascore/utils/array.py:509
low System graph software Dead code conf 1.00 Possibly dead Python function: patch_array_ufunc
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
dascore/utils/array.py:501
low System graph software Dead code conf 1.00 Possibly dead Python function: patch_to_obspy
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
dascore/utils/io.py:195
low System graph software Dead code conf 1.00 Possibly dead Python function: patch_to_xarray
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
dascore/utils/io.py:166
low System graph software Dead code conf 1.00 Possibly dead Python function: style_examples
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
scripts/_render_api.py:267
low System graph software Dead code conf 1.00 Possibly dead Python function: style_notes
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
scripts/_render_api.py:275
low System graph software Dead code conf 1.00 Possibly dead Python function: style_parameters
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
scripts/_render_api.py:242
low System graph software Dead code conf 1.00 Possibly dead Python function: to_str
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
dascore/utils/misc.py:391
low System graph quality Complexity conf 1.00 Very large file: dascore/core/coords.py (1759 lines)
Files with >800 lines often hide complexity hotspots and discourage tests.
low System graph quality Complexity conf 1.00 Very large file: tests/test_core/test_coordmanager.py (1496 lines)
Files with >800 lines often hide complexity hotspots and discourage tests.
low System graph quality Complexity conf 1.00 Very large file: tests/test_core/test_coords.py (2024 lines)
Files with >800 lines often hide complexity hotspots and discourage tests.
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