https://github.com/ctdegroot/aquakin
· scanned 2026-06-17 01:52 UTC (1 month, 1 week ago)
91 raw signals (0 security + 91 graph)
Last scanned 1 month, 1 week ago · v2 · last Δ -0.9 (diff) · 74 actionable findings from 1 signal source. 17 repeated signals grouped for readability. Security checks, system graph analysis, and verified AI-agent feedback are merged into one review queue.
All 1920 nodes from the latest scan, grouped by kind. Each node is a unit the engine identified (file, function, endpoint, table…). Most users won't need this view — it's primarily for debugging the engine's graph extraction or for AI agents that want to enumerate the project structure.
| Label | Layer | Status | Path |
|---|---|---|---|
simple_network |
software | healthy | tests/conftest.py:13 |
pytest_collection_modifyitems |
software | healthy | tests/conftest.py:48 |
test_forward_adjoint_is_direct_adjoint |
software | healthy | tests/unit/test_ad_helpers.py:15 |
test_with_adjoint_swaps_adjoint_without_mutating_original |
software | healthy | tests/unit/test_ad_helpers.py:21 |
test_check_finite_gradient_passes_and_raises |
software | healthy | tests/unit/test_ad_helpers.py:32 |
test_prettify_units |
software | healthy | tests/unit/test_units.py:23 |
test_chemical_subscripts_are_not_exponents |
software | healthy | tests/unit/test_units.py:27 |
test_idempotent |
software | healthy | tests/unit/test_units.py:34 |
net |
software | healthy | tests/unit/test_dataframe.py:18 |
test_batch_to_dataframe_basic |
software | healthy | tests/unit/test_dataframe.py:23 |
test_units_in_columns |
software | healthy | tests/unit/test_dataframe.py:37 |
test_to_csv_string_embeds_units_by_default |
software | healthy | tests/unit/test_dataframe.py:43 |
test_to_csv_to_file |
software | healthy | tests/unit/test_dataframe.py:52 |
test_pfr_indexed_by_position |
software | healthy | tests/unit/test_dataframe.py:61 |
test_stream_series_has_flow_column |
software | healthy | tests/unit/test_dataframe.py:70 |
test_biofilm_bulk_default |
software | healthy | tests/unit/test_dataframe.py:82 |
test_biofilm_profile_multiindex |
software | healthy | tests/unit/test_dataframe.py:95 |
_fake_plant |
software | healthy | tests/unit/test_dataframe.py:118 |
test_plant_to_dataframe_kinetic_unit |
software | healthy | tests/unit/test_dataframe.py:128 |
test_plant_to_dataframe_passive_unit |
software | healthy | tests/unit/test_dataframe.py:137 |
test_plant_to_dataframe_unknown_unit |
software | healthy | tests/unit/test_dataframe.py:146 |
_net |
software | healthy | tests/unit/test_stateless_unit.py:12 |
test_stateless_units_inherit_the_mixin |
software | healthy | tests/unit/test_stateless_unit.py:16 |
test_mixin_provides_trivial_state_members |
software | healthy | tests/unit/test_stateless_unit.py:29 |
test_mixin_composes_with_dataclass_fields |
software | healthy | tests/unit/test_stateless_unit.py:39 |
_load |
software | healthy | tests/unit/test_temperature.py:34 |
_rate |
software | healthy | tests/unit/test_temperature.py:40 |
test_unity_at_reference_temperature |
software | healthy | tests/unit/test_temperature.py:46 |
test_arrhenius_scaling |
software | healthy | tests/unit/test_temperature.py:53 |
test_correction_is_differentiable |
software | healthy | tests/unit/test_temperature.py:59 |
test_stoichiometry_untouched_by_temperature |
software | healthy | tests/unit/test_temperature.py:70 |
test_negative_theta_rejected |
software | healthy | tests/unit/test_temperature.py:79 |
test_network_without_temperature_unaffected |
software | healthy | tests/unit/test_temperature.py:85 |
test_asm1_unchanged_at_reference |
software | healthy | tests/unit/test_temperature.py:97 |
test_asm1_nitrification_slows_in_the_cold |
software | healthy | tests/unit/test_temperature.py:116 |
_make_tracks |
software | healthy | tests/unit/test_tracks.py:10 |
test_round_trip |
software | healthy | tests/unit/test_tracks.py:29 |
test_missing_particle_id_column_rejected |
software | healthy | tests/unit/test_tracks.py:42 |
test_non_ascending_t_rejected |
software | healthy | tests/unit/test_tracks.py:49 |
test_non_integer_particle_id_rejected |
software | healthy | tests/unit/test_tracks.py:56 |
test_row_length_mismatch_rejected |
software | healthy | tests/unit/test_tracks.py:63 |
test_inconsistent_field_names_rejected_on_write |
software | healthy | tests/unit/test_tracks.py:70 |
test_missing_file |
software | healthy | tests/unit/test_tracks.py:79 |
test_stoich_matrix_shape |
software | healthy | tests/unit/test_network.py:9 |
test_default_arrays |
software | healthy | tests/unit/test_network.py:18 |
test_namespaced_param_keys |
software | healthy | tests/unit/test_network.py:26 |
test_rates_signature |
software | healthy | tests/unit/test_network.py:31 |
test_dCdt |
software | healthy | tests/unit/test_network.py:40 |
test_summary_smoke |
software | healthy | tests/unit/test_network.py:50 |
test_species_units_and_descriptions |
software | healthy | tests/unit/test_network.py:56 |
Showing first 50 of this kind. Full payload available via the JSON button at the top of the page.
| Label | Layer | Status | Path |
|---|---|---|---|
CLAUDE.md |
software | healthy | CLAUDE.md |
README.md |
software | healthy | README.md |
pyproject.toml |
software | healthy | pyproject.toml |
LICENSE |
software | healthy | LICENSE |
conftest.py |
software | healthy | tests/conftest.py |
__init__.py |
software | healthy | tests/__init__.py |
test_ad_helpers.py |
software | healthy | tests/unit/test_ad_helpers.py |
test_units.py |
software | healthy | tests/unit/test_units.py |
test_dataframe.py |
software | healthy | tests/unit/test_dataframe.py |
test_stateless_unit.py |
software | healthy | tests/unit/test_stateless_unit.py |
test_temperature.py |
software | healthy | tests/unit/test_temperature.py |
test_tracks.py |
software | healthy | tests/unit/test_tracks.py |
test_network.py |
software | healthy | tests/unit/test_network.py |
test_reactor_protocol.py |
software | healthy | tests/unit/test_reactor_protocol.py |
test_conditions.py |
software | healthy | tests/unit/test_conditions.py |
test_rtd.py |
software | healthy | tests/unit/test_rtd.py |
test_units_check.py |
software | healthy | tests/unit/test_units_check.py |
test_nodes.py |
software | healthy | tests/unit/test_nodes.py |
test_latex.py |
software | healthy | tests/unit/test_latex.py |
test_ph_solver.py |
software | healthy | tests/unit/test_ph_solver.py |
test_loader.py |
software | healthy | tests/unit/test_loader.py |
test_default_atol.py |
software | healthy | tests/unit/test_default_atol.py |
test_network_params_expressions.py |
software | healthy | tests/unit/test_network_params_expressions.py |
test_cfd_reactor.py |
software | healthy | tests/unit/test_cfd_reactor.py |
test_parser.py |
software | healthy | tests/unit/test_parser.py |
test_uv_h2o2.py |
software | healthy | tests/integration/test_uv_h2o2.py |
test_bsm2_hydraulic_delay.py |
software | healthy | tests/integration/test_bsm2_hydraulic_delay.py |
test_bsm2_bypass.py |
software | healthy | tests/integration/test_bsm2_bypass.py |
test_dynamic_stoich.py |
software | healthy | tests/integration/test_dynamic_stoich.py |
test_primary_clarifier.py |
software | healthy | tests/integration/test_primary_clarifier.py |
test_flow_affinity_check.py |
software | healthy | tests/integration/test_flow_affinity_check.py |
test_bsm2.py |
software | healthy | tests/integration/test_bsm2.py |
test_discrete_adjoint.py |
software | healthy | tests/integration/test_discrete_adjoint.py |
test_asm_family.py |
software | healthy | tests/integration/test_asm_family.py |
test_bsm2_storage.py |
software | healthy | tests/integration/test_bsm2_storage.py |
test_biofilm_variant.py |
software | healthy | tests/integration/test_biofilm_variant.py |
test_bsm2_options.py |
software | healthy | tests/integration/test_bsm2_options.py |
test_control_signal_validation.py |
software | healthy | tests/integration/test_control_signal_validation.py |
test_wats_sewer.py |
software | healthy | tests/integration/test_wats_sewer.py |
test_ozone_bromate.py |
software | healthy | tests/integration/test_ozone_bromate.py |
test_compile_cache.py |
software | healthy | tests/integration/test_compile_cache.py |
test_calibrate.py |
software | healthy | tests/integration/test_calibrate.py |
test_plant_assembly.py |
software | healthy | tests/integration/test_plant_assembly.py |
test_mass_balance.py |
software | healthy | tests/integration/test_mass_balance.py |
test_warm_start.py |
software | healthy | tests/integration/test_warm_start.py |
test_bsm2_reject_control.py |
software | healthy | tests/integration/test_bsm2_reject_control.py |
test_profile.py |
software | healthy | tests/integration/test_profile.py |
test_bsm2_seasonal.py |
software | healthy | tests/integration/test_bsm2_seasonal.py |
test_pfr_simple.py |
software | healthy | tests/integration/test_pfr_simple.py |
test_cfd_fake_caller.py |
software | healthy | tests/integration/test_cfd_fake_caller.py |
Showing first 50 of this kind. Full payload available via the JSON button at the top of the page.
| Label | Layer | Status | Path |
|---|---|---|---|
_Bogus |
software | healthy | tests/unit/test_latex.py:143 |
CustomController |
software | healthy | tests/integration/test_control_signal_validation.py:78 |
Dimension |
software | healthy | aquakin/utils/units.py:58 |
_ParseError |
software | healthy | aquakin/utils/units.py:275 |
_ProductParser |
software | healthy | aquakin/utils/units.py:303 |
UnitWarning |
software | healthy | aquakin/utils/units.py:350 |
_Ctx |
software | healthy | aquakin/utils/units.py:372 |
PrimaryClarifier |
software | healthy | aquakin/plant/primary_clarifier.py:37 |
PiecewiseConstantSchedule |
software | healthy | aquakin/plant/schedule.py:20 |
IdealClarifier |
software | healthy | aquakin/plant/clarifier.py:38 |
IdealThickener |
software | healthy | aquakin/plant/separators.py:43 |
Stream |
software | healthy | aquakin/plant/streams.py:15 |
StreamSeries |
software | healthy | aquakin/plant/streams.py:68 |
TakacsClarifier |
software | healthy | aquakin/plant/takacs.py:77 |
ASM1toADM1 |
software | healthy | aquakin/plant/interfaces.py:53 |
ADM1toASM1 |
software | healthy | aquakin/plant/interfaces.py:247 |
InfluentSeries |
software | healthy | aquakin/plant/influent.py:44 |
PIController |
software | healthy | aquakin/plant/control.py:29 |
FlowContext |
software | healthy | aquakin/plant/units.py:15 |
Unit |
software | healthy | aquakin/plant/units.py:40 |
StatelessUnit |
software | healthy | aquakin/plant/units.py:119 |
ActivatedSludgeSizing |
software | healthy | aquakin/plant/design.py:43 |
SludgeMetrics |
software | healthy | aquakin/plant/design.py:240 |
HydraulicDelayUnit |
software | healthy | aquakin/plant/delay.py:45 |
StateTranslator |
software | healthy | aquakin/plant/translators.py:21 |
IdentityTranslator |
software | healthy | aquakin/plant/translators.py:41 |
ADM1DigesterUnit |
software | healthy | aquakin/plant/digester.py:35 |
MixerUnit |
software | healthy | aquakin/plant/mixer.py:21 |
SplitterUnit |
software | healthy | aquakin/plant/mixer.py:95 |
CSTRUnit |
software | healthy | aquakin/plant/cstr.py:29 |
Connection |
software | healthy | aquakin/plant/plant.py:51 |
ParameterLayout |
software | healthy | aquakin/plant/plant.py:66 |
PlantCheck |
software | healthy | aquakin/plant/plant.py:85 |
PlantSolution |
software | healthy | aquakin/plant/plant.py:125 |
SteadyStateResult |
software | healthy | aquakin/plant/plant.py:247 |
Plant |
software | healthy | aquakin/plant/plant.py:288 |
StorageTank |
software | healthy | aquakin/plant/storage.py:48 |
ExternalCarbon |
software | healthy | aquakin/plant/bsm/bsm2.py:186 |
RejectStorage |
software | healthy | aquakin/plant/bsm/bsm2.py:206 |
InfluentBypass |
software | healthy | aquakin/plant/bsm/bsm2.py:235 |
HydraulicDelay |
software | healthy | aquakin/plant/bsm/bsm2.py:257 |
BSM2Evaluation |
software | healthy | aquakin/plant/bsm/evaluation.py:66 |
BSM1Evaluation |
software | healthy | aquakin/plant/bsm/evaluation.py:338 |
NetworkMeta |
software | healthy | aquakin/schema/network_spec.py:15 |
SpeciesSpec |
software | healthy | aquakin/schema/network_spec.py:26 |
ConditionSpec |
software | healthy | aquakin/schema/network_spec.py:37 |
PriorSpec |
software | healthy | aquakin/schema/network_spec.py:51 |
TemperatureCorrectionSpec |
software | healthy | aquakin/schema/network_spec.py:96 |
ParameterSpec |
software | healthy | aquakin/schema/network_spec.py:125 |
ReactionSpec |
software | healthy | aquakin/schema/network_spec.py:166 |
Showing first 50 of this kind. Full payload available via the JSON button at the top of the page.
| Label | Layer | Status | Path |
|---|---|---|---|
tests |
software | healthy | tests |
unit |
software | healthy | tests/unit |
integration |
software | healthy | tests/integration |
validation |
software | healthy | tests/validation |
fixtures |
software | healthy | tests/fixtures |
scripts |
software | healthy | scripts |
.github |
software | healthy | .github |
workflows |
software | healthy | .github/workflows |
examples |
software | healthy | examples |
aquakin |
software | healthy | aquakin |
utils |
software | healthy | aquakin/utils |
plant |
software | healthy | aquakin/plant |
bsm |
software | healthy | aquakin/plant/bsm |
schema |
software | healthy | aquakin/schema |
transport |
software | healthy | aquakin/transport |
openfoam |
software | healthy | aquakin/transport/openfoam |
core |
software | healthy | aquakin/core |
integrate |
software | healthy | aquakin/integrate |
networks |
software | healthy | aquakin/networks |
docs |
software | healthy | docs |
| Label | Layer | Status | Path |
|---|---|---|---|
test |
cicd | healthy | .github/workflows/ci.yml |
slow |
cicd | healthy | .github/workflows/ci.yml |
validation |
cicd | healthy | .github/workflows/ci.yml |
| Label | Layer | Status | Path |
|---|---|---|---|
ctdegroot__aquakin |
software | healthy | /data/fable5_failed_archive/ctdegroot__aquakin |
| Label | Layer | Status | Path |
|---|---|---|---|
5.5.1.2 |
network | healthy | aquakin/networks/wats_sewer.yaml |
| Label | Layer | Status | Path |
|---|---|---|---|
gha::ci |
cicd | healthy | .github/workflows/ci.yml |
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