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wilke/GoWe

https://github.com/wilke/GoWe · scanned 2026-06-16 00:58 UTC (2 months, 1 week ago)

30 raw signals (0 security + 30 graph)

UNIFIED Repobility · multi-layer engine · AI coders

Complete repo analysis

Last scanned 2 months, 1 week ago · v1 · 30 actionable findings from 1 signal source. Security checks, system graph analysis, and verified AI-agent feedback are merged into one review queue.

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All 477 nodes from the latest scan, grouped by kind. Each node is a unit the engine identified (file, function, endpoint, table…). Most users won't need this view — it's primarily for debugging the engine's graph extraction or for AI agents that want to enumerate the project structure.

LabelLayerStatusPath
docker-compose.test.yml software healthy docker-compose.test.yml
CONFORMANCE.md software healthy CONFORMANCE.md
README.md software healthy README.md
CLAUDE.md software healthy CLAUDE.md
Dockerfile software healthy Dockerfile
go.mod software healthy go.mod
.env.example software healthy .env.example
Makefile software healthy Makefile
docker-compose.yml software healthy docker-compose.yml
expected-results.json software healthy testdata/expected-results.json
touch-file-job.yml software healthy testdata/worker-test/touch-file-job.yml
echo-pipeline-job.yml software healthy testdata/worker-test/echo-pipeline-job.yml
simple-echo-job.yml software healthy testdata/worker-test/simple-echo-job.yml
echo-job.yml software healthy testdata/cwl-conformance/echo-job.yml
wc-job.yml software healthy testdata/cwl-conformance/wc-job.yml
revsort-job.yml software healthy testdata/cwl-conformance/revsort-job.yml
bwa-mem-job.yml software healthy testdata/cwl-conformance/bwa-mem-job.yml
job.yml software healthy testdata/separate/job.yml
job.yml software healthy testdata/distributed-test/job.yml
stage.go software healthy internal/iwdr/stage.go
iwdr.go software healthy internal/iwdr/iwdr.go
file_ops.go software healthy internal/iwdr/file_ops.go
iwdr_test.go software healthy internal/iwdr/iwdr_test.go
builder_test.go software healthy internal/cmdline/builder_test.go
builder.go software healthy internal/cmdline/builder.go
client_test.go software healthy internal/bvbrc/client_test.go
auth.go software healthy internal/bvbrc/auth.go
auth_test.go software healthy internal/bvbrc/auth_test.go
client.go software healthy internal/bvbrc/client.go
bundle_test.go software healthy internal/bundle/bundle_test.go
bundle.go software healthy internal/bundle/bundle.go
config.go software healthy internal/config/config.go
remap.go software healthy internal/cwltool/remap.go
helpers_ws_test.go software healthy internal/cwltool/helpers_ws_test.go
cwltool.go software healthy internal/cwltool/cwltool.go
helpers.go software healthy internal/cwltool/helpers.go
exprtool.go software healthy internal/exprtool/exprtool.go
handlers.go software healthy internal/ui/handlers.go
routes.go software healthy internal/ui/routes.go
session_test.go software healthy internal/ui/session_test.go
templates.go software healthy internal/ui/templates.go
middleware.go software healthy internal/ui/middleware.go
session.go software healthy internal/ui/session.go
logs.go software healthy internal/cli/logs.go
apps.go software healthy internal/cli/apps.go
upload_ws_test.go software healthy internal/cli/upload_ws_test.go
run.go software healthy internal/cli/run.go
register.go software healthy internal/cli/register.go
status.go software healthy internal/cli/status.go
list.go software healthy internal/cli/list.go

Showing first 50 of this kind. Full payload available via the JSON button at the top of the page.

LabelLayerStatusPath
testdata software healthy testdata
worker-test software healthy testdata/worker-test
cwl-conformance software healthy testdata/cwl-conformance
separate software healthy testdata/separate
distributed-test software healthy testdata/distributed-test
internal software healthy internal
iwdr software healthy internal/iwdr
cmdline software healthy internal/cmdline
bvbrc software healthy internal/bvbrc
bundle software healthy internal/bundle
config software healthy internal/config
cwltool software healthy internal/cwltool
exprtool software healthy internal/exprtool
ui software healthy internal/ui
cli software healthy internal/cli
worker software healthy internal/worker
fileliteral software healthy internal/fileliteral
requirements software healthy internal/requirements
execution software healthy internal/execution
stepinput software healthy internal/stepinput
cwlrunner software healthy internal/cwlrunner
server software healthy internal/server
logging software healthy internal/logging
toolexec software healthy internal/toolexec
store software healthy internal/store
executor software healthy internal/executor
validate software healthy internal/validate
loadcontents software healthy internal/loadcontents
parser software healthy internal/parser
cwloutput software healthy internal/cwloutput
scheduler software healthy internal/scheduler
secondaryfiles software healthy internal/secondaryfiles
cwlexpr software healthy internal/cwlexpr
docs software healthy docs
tools software healthy docs/tools
ui software healthy ui
assets software healthy ui/assets
js software healthy ui/assets/js
css software healthy ui/assets/css
scripts software healthy scripts
deploy software healthy deploy
apptainer software healthy deploy/apptainer
cmd software healthy cmd
gen-cwl-tools software healthy cmd/gen-cwl-tools
cwl-runner software healthy cmd/cwl-runner
verify-bvbrc software healthy cmd/verify-bvbrc
smoke-test software healthy cmd/smoke-test
cli software healthy cmd/cli
worker software healthy cmd/worker
server software healthy cmd/server

Showing first 50 of this kind. Full payload available via the JSON button at the top of the page.

LabelLayerStatusPath
midX software healthy ui/assets/js/dag-editor.js:midX
initSubmissionPolling software healthy ui/assets/js/app.js:initSubmissionPolling
updateSubmissionUI software healthy ui/assets/js/app.js:updateSubmissionUI
validateForm software healthy ui/assets/js/app.js:validateForm
formatCWL software healthy ui/assets/js/app.js:formatCWL
copyToClipboard software healthy ui/assets/js/app.js:copyToClipboard
formatBytes software healthy ui/assets/js/app.js:formatBytes
formatDuration software healthy ui/assets/js/app.js:formatDuration
folderPath software healthy ui/assets/js/app.js:folderPath
handleTool software healthy mcp-servers/typescript/src/index.ts:handleTool
main software healthy mcp-servers/typescript/src/index.ts:main
raw software healthy mcp-servers/typescript/src/bvbrc-client.ts:raw
loadToken software healthy mcp-servers/typescript/src/bvbrc-client.ts:loadToken
parseTokenUsername software healthy mcp-servers/typescript/src/bvbrc-client.ts:parseTokenUserna…
parseWorkspaceObject software healthy mcp-servers/typescript/src/bvbrc-client.ts:parseWorkspaceOb…
__init__ software healthy mcp-servers/python/src/bvbrc_mcp/client.py:58
username software healthy mcp-servers/python/src/bvbrc_mcp/client.py:71
is_authenticated software healthy mcp-servers/python/src/bvbrc_mcp/client.py:81
enumerate_apps software healthy mcp-servers/python/src/bvbrc_mcp/client.py:87
query_app_description software healthy mcp-servers/python/src/bvbrc_mcp/client.py:101
start_app software healthy mcp-servers/python/src/bvbrc_mcp/client.py:110
query_tasks software healthy mcp-servers/python/src/bvbrc_mcp/client.py:130
enumerate_tasks software healthy mcp-servers/python/src/bvbrc_mcp/client.py:150
kill_task software healthy mcp-servers/python/src/bvbrc_mcp/client.py:169
query_app_log software dead mcp-servers/python/src/bvbrc_mcp/client.py:174
workspace_ls software healthy mcp-servers/python/src/bvbrc_mcp/client.py:185
workspace_get software healthy mcp-servers/python/src/bvbrc_mcp/client.py:202
workspace_create software healthy mcp-servers/python/src/bvbrc_mcp/client.py:215
workspace_delete software healthy mcp-servers/python/src/bvbrc_mcp/client.py:231
workspace_copy software healthy mcp-servers/python/src/bvbrc_mcp/client.py:238
workspace_move software healthy mcp-servers/python/src/bvbrc_mcp/client.py:248
workspace_set_permissions software healthy mcp-servers/python/src/bvbrc_mcp/client.py:259
workspace_get_download_url software healthy mcp-servers/python/src/bvbrc_mcp/client.py:266
_call_app_service software healthy mcp-servers/python/src/bvbrc_mcp/client.py:274
_call_workspace software healthy mcp-servers/python/src/bvbrc_mcp/client.py:277
_rpc_call software healthy mcp-servers/python/src/bvbrc_mcp/client.py:280
_load_token software healthy mcp-servers/python/src/bvbrc_mcp/client.py:304
_parse_workspace_object software healthy mcp-servers/python/src/bvbrc_mcp/client.py:324
list_tools software healthy mcp-servers/python/src/bvbrc_mcp/server.py:207
call_tool software healthy mcp-servers/python/src/bvbrc_mcp/server.py:213
handle_tool software healthy mcp-servers/python/src/bvbrc_mcp/server.py:222
list_resources software healthy mcp-servers/python/src/bvbrc_mcp/server.py:319
read_resource software healthy mcp-servers/python/src/bvbrc_mcp/server.py:338
_to_json software healthy mcp-servers/python/src/bvbrc_mcp/server.py:366
main software healthy mcp-servers/python/src/bvbrc_mcp/server.py:371
run_server software healthy mcp-servers/python/src/bvbrc_mcp/server.py:381
api software healthy examples/api/common.py:19
pp software healthy examples/api/common.py:52

LabelLayerStatusPath
port:7445 network healthy docker-compose.test.yml
port:9000 network healthy docker-compose.test.yml
port:9001 network healthy docker-compose.test.yml
port:8080 network healthy README.md
port:8090 network healthy docker-compose.yml
port:8092 network healthy scripts/run-conformance-distributed-apptainer.sh
port:8094 network healthy scripts/run-conformance-server-worker.sh
port:8091 network healthy scripts/start-server.sh

LabelLayerStatusPath
image::Dockerfile hardware healthy Dockerfile
image::mcp-servers/typescript/Dockerfile hardware healthy mcp-servers/typescript/Dockerfile
image::mcp-servers/python/Dockerfile hardware healthy mcp-servers/python/Dockerfile
gowe-server hardware healthy docker-compose.yml
worker-1 hardware healthy docker-compose.yml
worker-2 hardware healthy docker-compose.yml
worker-docker hardware healthy docker-compose.yml

LabelLayerStatusPath
BVBRCClient software healthy mcp-servers/typescript/src/bvbrc-client.ts:BVBRCClient
Task software healthy mcp-servers/python/src/bvbrc_mcp/client.py:15
AppDescription software healthy mcp-servers/python/src/bvbrc_mcp/client.py:30
WorkspaceObject software healthy mcp-servers/python/src/bvbrc_mcp/client.py:40
BVBRCClient software healthy mcp-servers/python/src/bvbrc_mcp/client.py:55

LabelLayerStatusPath
auth::pkg/staging/shock.go security healthy pkg/staging/shock.go
auth::pkg/staging/shock_test.go security healthy pkg/staging/shock_test.go
auth::internal/executor/bvbrc.go security healthy internal/executor/bvbrc.go
auth::pkg/staging/workspace.go security healthy pkg/staging/workspace.go

LabelLayerStatusPath
mongodb data healthy docker-compose.test.yml
sqlite data healthy README.md

LabelLayerStatusPath
vps::aws hardware healthy go.mod
vps::ec2 hardware healthy go.mod

LabelLayerStatusPath
repobility-clone-ozq41w_n software healthy /tmp/repobility-clone-ozq41w_n

LabelLayerStatusPath
nginx network healthy internal/server/handler_sse.go

LabelLayerStatusPath
127.0.0.1 network healthy scripts/test-shock-stager.go

LabelLayerStatusPath
gpu (detected) hardware healthy README.md

LabelLayerStatusPath
password_literal::configs/credentials.example.yaml security healthy configs/credentials.example.yaml
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