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SPMQT-Lab/ProbeFlow

https://github.com/SPMQT-Lab/ProbeFlow · scanned 2026-06-16 00:19 UTC (2 months, 2 weeks ago)

130 raw signals (0 security + 130 graph)

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UNIFIED Repobility · multi-layer engine · AI coders

Complete repo analysis

Last scanned 2 months, 2 weeks ago · v1 · 112 actionable findings from 1 signal source. 18 repeated signals grouped for readability. Security checks, system graph analysis, and verified AI-agent feedback are merged into one review queue.

JSON
Combined
78.5
/100
Security checks
79
0 findings
System graph
79
55.6% cov · 112 findings
Critical
0
click to filter
Agents
10
0 votes
Crowd
0
reported
Severity distribution — click a segment to filter
Active filters: excluding tests × Reset all
Severity: Critical 0 High 0 Medium 5 Low 53 9-Layer: Software Security Quality Integrity Frontend Hardware Data Network Cicd Source: Security checks 0 System graph 112 Crowd 0 Layer: Software 24 Frontend 1 Security 1 Cicd 1 Quality 85
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Scan summary Repository scanned at 78.5/100 with 55.6% coverage. It contains 6395 nodes across 0 cross-layer flows, written primarily in mixed languages. Engine surfaced 130 findings — concentrated in quality (102), software (24), cicd (2). Risk profile is low: 0 critical, 0 high, 5 medium. Recommended next step: open the quality layer findings first — that's where the highest-impact wins live.

Showing 58 of 112 actionable findings. 130 raw detector signals were grouped into reader-sized issues. Click TP / FP to vote on a finding's accuracy — votes adjust the confidence weighting and improve detection across the platform.

medium System graph quality Placeholder conf 1.00 Critical user flow still appears backed by mock or placeholder data
A payment/auth/admin/order/billing-style flow contains mock, fake, TODO, dummy, or placeholder markers in runtime source. In the Fable corpus this is a high-leverage completeness smell: the app can look finished while the money, identity, or tenant flow is still scaffolded.
Mock dataCritical flowGenerated repo pattern
medium System graph quality Integrity conf 1.00 Network/subprocess call without timeout or try/except — probeflow/gui/app.py:1666
`subprocess.Popen(...)` here lacks both a `timeout=` arg and an enclosing try/except. This is exactly the class of bug that took down our git-clone earlier (HTTP/2 stream cancel surfaced as a fatal). Add a `timeout=` and wrap in try/except, or use a wrapper that retries.
runtime safetyRobustness
medium System graph quality Integrity conf 1.00 Network/subprocess call without timeout or try/except — probeflow/gui/terminal/__init__.py:339
`subprocess.Popen(...)` here lacks both a `timeout=` arg and an enclosing try/except. This is exactly the class of bug that took down our git-clone earlier (HTTP/2 stream cancel surfaced as a fatal). Add a `timeout=` and wrap in try/except, or use a wrapper that retries.
runtime safetyRobustness
medium System graph security Coverage conf 1.00 No auth library detected
The scanner did not find any standard auth library (JWT, OAuth, NextAuth, Auth0, etc.). The repo has auth/admin/session surface indicators, so auth may live in custom code, in a separate service, or be missing.
auth
medium System graph quality Placeholder conf 1.00 Placeholder or mock-heavy implementation detected
Found 28 placeholder/mock markers across 14 source files. This often means the repo looks complete while core flows still use generated scaffolding or fake data.
Mock dataIncompleteGenerated repo pattern
low System graph quality Debug conf 1.00 Debug logging residue appears in source files
Found 106 console/debugger/print-style debug statements in non-test source. This is a common fast-generation residue before production cleanup.
CleanupRepo hardeningGenerated repo pattern
low System graph software Dead code candidate conf 1.00 File has no detected symbols: probeflow/cli/_legacy.py
Source file with no class/function declarations — possible config, dead code, or scratch file.
low System graph cicd CI/CD security conf 1.00 2 occurrences GitHub Action is tag-pinned rather than SHA-pinned
actions/setup-python@v5 can move without a code change in this repo. Pin third-party actions to a reviewed 40-character commit SHA.
lines 25, 55
.github/workflows/ci.yml:25, 55 (2 hits)
CI/CD securitySupply chainGithub actions
low System graph quality Integrity conf 1.00 18 occurrences Near-duplicate function bodies in 2 places
Functions with the same first-5-line body hash: probeflow/measurements/export.py:measurements_to_csv_text, probeflow/measurements/export.py:measurements_to_csv This is *the* AI-coder failure mode (4× more duplication in vibe-coded repos — see https://jw.hn/ai-code-hygiene). Consolidate or document…
18 occurrences
repo-level (18 hits)
duplicatesduplication
low System graph quality Integrity conf 1.00 Near-duplicate function bodies in 3 places
Functions with the same first-5-line body hash: probeflow/gui/models.py:from_index_item, probeflow/gui/models.py:from_index_item, probeflow/gui/models.py:from_index This is *the* AI-coder failure mode (4× more duplication in vibe-coded repos — see https://jw.hn/ai-code-hygiene). Consolidate or doc…
duplicatesduplication
low System graph quality Integrity conf 1.00 Near-duplicate function bodies in 8 places
Functions with the same first-5-line body hash: probeflow/gui/workers.py:work, probeflow/gui/workers.py:work, probeflow/gui/workers.py:work, probeflow/gui/workers.py:work This is *the* AI-coder failure mode (4× more duplication in vibe-coded repos — see https://jw.hn/ai-code-hygiene). Consolidate …
duplicatesduplication
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `_on_canvas_roi_copy` in probeflow/gui/dialogs/image_viewer_build_mixin.py:774
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `_on_canvas_roi_copy` in probeflow/gui/viewer/image_viewer_roi_mixin.py:333
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `act_copy` in probeflow/gui/viewer/context_menus.py:85
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `c_x_old` in tests/test_bragg_calibration.py:313
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `lattice_structures_v1` in probeflow/gui/lattice_correction_ui.py:11
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `m_old` in tests/test_inverse_fft.py:70
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `nOld` in tests/test_sxm_processing_comment.py:100
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `par32_v2` in tests/test_spec_io.py:189
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `stem_legacy` in probeflow/io/roi_sidecar.py:41
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `test_no_speed_and_no_extras_returns_copy` in tests/test_mains_pickup.py:322
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `test_no_usable_adjacent_differences_returns_copy` in tests/test_processing.py:649
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `test_precomputed_mask_returned_as_copy` in tests/test_measurements_roi_resolve.py:23
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph quality Integrity conf 1.00 Old/deprecated-named symbol `u_old` in probeflow/processing/tv.py:136
Names with suffixes like `_old`, `_v1`, `_deprecated` usually indicate replaced-but-not-removed code (typical AI-coder leftover). Confirm and delete, or rename if it's the active version.
old markerDead code
low System graph software Dead code conf 1.00 Possibly dead Python function: add_current_line_profile_delta_measurement
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
probeflow/gui/viewer/image_measurements.py:590
low System graph software Dead code conf 1.00 Possibly dead Python function: add_current_line_profile_measurement
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
probeflow/gui/viewer/image_measurements.py:325
low System graph software Dead code conf 1.00 Possibly dead Python function: add_roi_item
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
probeflow/gui/image_canvas.py:614
low System graph software Dead code conf 1.00 Possibly dead Python function: add_selected_step_height_measurement
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
probeflow/gui/viewer/image_measurements.py:289
low System graph software Dead code conf 1.00 Possibly dead Python function: array_to_rgba
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
probeflow/processing/display.py:193
low System graph software Dead code conf 1.00 Possibly dead Python function: contextMenuEvent
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
probeflow/gui/image_canvas.py:1532
low System graph software Dead code conf 1.00 Possibly dead Python function: contextMenuEvent
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
probeflow/gui/browse/cards.py:270
low System graph software Dead code conf 1.00 Possibly dead Python function: detect_feature_maxima_for_active_roi
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
probeflow/gui/viewer/image_measurements.py:661
low System graph software Dead code conf 1.00 Possibly dead Python function: dismiss_all
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
probeflow/gui/viewer/floating_panel.py:212
low System graph software Dead code conf 1.00 Possibly dead Python function: is_open
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
probeflow/gui/viewer/floating_panel.py:161
low System graph software Dead code conf 1.00 Possibly dead Python function: panel
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
probeflow/gui/viewer/floating_panel.py:164
low System graph software Dead code conf 1.00 Possibly dead Python function: reset_zoom
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
probeflow/gui/image_canvas.py:341
low System graph software Dead code conf 1.00 Possibly dead Python function: restore_points
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
probeflow/gui/viewer/set_zero_plane.py:31
low System graph software Dead code conf 1.00 Possibly dead Python function: result_count
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
probeflow/gui/widgets/measurement_results_panel.py:15
low System graph software Dead code conf 1.00 Possibly dead Python function: set_active_roi_id
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
probeflow/gui/image_canvas.py:567
low System graph software Dead code conf 1.00 Possibly dead Python function: set_clip_text
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
probeflow/gui/viewer/histogram.py:314
low System graph software Dead code conf 1.00 Possibly dead Python function: set_custom_length_nm
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
probeflow/gui/viewer/widgets.py:160
low System graph software Dead code conf 1.00 Possibly dead Python function: set_filter_mode
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
probeflow/gui/browse/panels.py:245
low System graph software Dead code conf 1.00 Possibly dead Python function: set_selection_tool
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
probeflow/gui/image_canvas.py:682
low System graph software Dead code conf 1.00 Possibly dead Python function: set_show_markers
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
probeflow/gui/image_canvas.py:412
low System graph software Dead code conf 1.00 Possibly dead Python function: thumbnail_channel
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
probeflow/gui/browse/thumbnail_grid.py:613
low System graph software Dead code conf 1.00 Possibly dead Python function: thumbnail_processing
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
probeflow/gui/browse/thumbnail_grid.py:619
low System graph software Dead code conf 1.00 Possibly dead Python function: tip
No callers detected by AST scan in this repo. Could be exported for external callers or a framework handler.
probeflow/gui/_tooltips.py:8
low System graph quality Provenance conf 1.00 Shallow git history limits provenance confidence
The repository is a shallow clone. Origin/evolution analysis cannot distinguish fresh generation, imported legacy code, or long-lived human code with high confidence.
Git historyGenerated repo pattern
low System graph quality Complexity conf 1.00 Very large file: probeflow/gui/app.py (1753 lines)
Files with >800 lines often hide complexity hotspots and discourage tests.
low System graph quality Complexity conf 1.00 Very large file: probeflow/gui/dialogs/definitions.py (2274 lines)
Files with >800 lines often hide complexity hotspots and discourage tests.
low System graph quality Complexity conf 1.00 Very large file: probeflow/gui/dialogs/fft_viewer.py (1806 lines)
Files with >800 lines often hide complexity hotspots and discourage tests.
low System graph quality Complexity conf 1.00 Very large file: probeflow/gui/features/__init__.py (2418 lines)
Files with >800 lines often hide complexity hotspots and discourage tests.
low System graph quality Complexity conf 1.00 Very large file: probeflow/gui/image_canvas.py (1538 lines)
Files with >800 lines often hide complexity hotspots and discourage tests.
low System graph quality Complexity conf 1.00 Very large file: probeflow/gui/spec_viewer/single.py (1245 lines)
Files with >800 lines often hide complexity hotspots and discourage tests.
low System graph quality Complexity conf 1.00 Very large file: probeflow/processing/state.py (1253 lines)
Files with >800 lines often hide complexity hotspots and discourage tests.
low System graph quality Complexity conf 1.00 Very large file: tests/test_gui_processing_panel.py (2262 lines)
Files with >800 lines often hide complexity hotspots and discourage tests.
low System graph quality Complexity conf 1.00 Very large file: tests/test_processing.py (1538 lines)
Files with >800 lines often hide complexity hotspots and discourage tests.
low System graph quality Complexity conf 1.00 Very large file: tests/test_processing_physics.py (1155 lines)
Files with >800 lines often hide complexity hotspots and discourage tests.
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